CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 2
cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16269	Canola	plastid	23.92	100.0
CDY51581	Canola	plastid	23.59	98.61
CDY05100	Canola	plasma membrane	94.68	94.68
CDX90757	Canola	plasma membrane	94.68	94.68
CDY72002	Canola	plastid	26.58	94.12
CDY25253	Canola	plasma membrane	92.69	92.69
CDX94261	Canola	plasma membrane	92.36	92.36
AT4G10380.1	Thale cress	cytosol	90.37	89.47
GSMUA_AchrUn_...	Banana	extracellular	60.13	81.17
VIT_02s0025g03260.t01	Wine grape	plastid	78.07	78.86
Solyc08g013730.2.1	Tomato	cytosol, plasma membrane, plastid	76.74	78.31
PGSC0003DMT400014852	Potato	cytosol, plasma membrane, plastid	76.74	78.04
KRH35064	Soybean	plastid	70.1	70.57
EER91378	Sorghum	plastid	70.1	70.1
KRG91709	Soybean	plastid	58.8	69.41
Zm00001d032461_P001	Maize	plastid	69.1	68.87
TraesCS1A01G177500.1	Wheat	plastid	68.11	68.33
TraesCS1D01G176000.1	Wheat	plastid	67.77	68.23
TraesCS1B01G202700.1	Wheat	plastid	67.44	68.12
Os10t0513200-01	Rice	plasma membrane	69.1	66.88
CDY39946	Canola	cytosol, peroxisome, plasma membrane	63.79	62.95
CDX87340	Canola	cytosol, peroxisome, plasma membrane	63.46	62.62
CDY53224	Canola	cytosol, peroxisome, plasma membrane	63.12	62.3
HORVU3Hr1G014440.3	Barley	golgi, mitochondrion, plasma membrane	53.16	62.02
CDY66949	Canola	cytosol, peroxisome, plasma membrane	62.13	61.31
GSMUA_Achr1P04130_001	Banana	plasma membrane	72.09	60.45
HORVU1Hr1G047100.3	Barley	plastid	59.8	49.05
CDY71538	Canola	extracellular, plasma membrane, vacuole	35.88	47.37
CDX99689	Canola	extracellular	26.25	46.75
CDX74558	Canola	plasma membrane	42.86	45.58
CDY01700	Canola	plasma membrane	42.52	45.23
CDY65403	Canola	plasma membrane	40.2	42.76
CDX99688	Canola	plasma membrane	39.53	42.05
CDY41749	Canola	plasma membrane	39.2	39.86
CDY35532	Canola	endoplasmic reticulum, extracellular, vacuole	36.21	38.79
CDX98596	Canola	cytosol, peroxisome, plasma membrane	38.21	38.59
CDY01565	Canola	cytosol, peroxisome, plasma membrane	38.21	38.59
CDX78905	Canola	cytosol, peroxisome, plasma membrane	37.54	38.05
CDX99411	Canola	cytosol, peroxisome, plasma membrane	37.21	37.71
CDY17241	Canola	cytosol, plasma membrane, plastid, vacuole	35.22	37.06
CDX84320	Canola	extracellular, plasma membrane, plastid, vacuole	35.22	37.06
CDY17243	Canola	extracellular, plasma membrane, plastid, vacuole	34.88	36.71
CDX84321	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	34.88	36.71
CDX84114	Canola	plasma membrane	40.2	36.23
CDY27709	Canola	plasma membrane	31.23	34.56
CDY05231	Canola	plasma membrane	31.23	34.56
CDY29922	Canola	peroxisome, plasma membrane, vacuole	35.88	32.93
CDY35531	Canola	vacuole	33.22	31.95
CDY29921	Canola	vacuole	33.22	31.75
CDY35528	Canola	cytosol	12.96	28.89
CDY69767	Canola	plasma membrane	24.25	27.34

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	GO:A0A078BSF6	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlants:CDX67591
ProteinID:CDX67591	ProteinID:CDX67591.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00098735001
InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221
PANTHER:PTHR19139	PANTHER:PTHR19139:SF102	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI0004EEF9D7	SEG:seg

Description

BnaA07g16310D

Coordinates

chrLK031787:+:1118487..1125290

Molecular Weight (calculated)

31279.3 Da

IEP (calculated)

9.007

GRAVY (calculated)

0.461

Length

301 amino acids

Sequence
(BLAST)

001: MSPPEAEMGA VAVTAPPKPG TPRGPLITGM RVDSVSFDHR KPIPPCKCLP MMGNPWGQHD TCFTDIPSPG VSLTRKLGAE FVGTFILIFT ATAGPIVNQK
101: YDGAETLIGN AACAGLAVMI IILSTGHISG AHLNPSMTIA FAALRHFPWA QVPAYIAAQV SASICASFAL KAVFHPFMSG GVTVPSVSVG QAFALEFIIS
201: FILLFVITAV ATDTRAVGEL AGIAVGATVM LNNLVAGPSS GASMNPVRTL GPALASGNYR SLWVYMVAPT LGAISGAAVY TGVKLNDNVS DPPRQVRSFR
301: R

Best Arabidopsis Sequence Match ( AT4G10380.1 )
(BLAST)

001: MAPPEAEVGA VMVMAPPTPG TPGTPGGPLI TGMRVDSMSF DHRKPTPRCK CLPVMGSTWG QHDTCFTDFP SPDVSLTRKL GAEFVGTFIL IFTATAGPIV
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR

Arabidopsis Description

NIP5-1At4g10380 [Source:UniProtKB/TrEMBL;Acc:A3KPG0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.