Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025435.1-P | Field mustard | plastid | 48.69 | 79.27 |
| CDX99688 | Canola | plasma membrane | 75.28 | 71.02 |
| CDY71538 | Canola | extracellular, plasma membrane, vacuole | 54.68 | 64.04 |
| CDY65403 | Canola | plasma membrane | 67.79 | 63.96 |
| CDY01700 | Canola | plasma membrane | 60.3 | 56.89 |
| CDX74558 | Canola | plasma membrane | 59.93 | 56.54 |
| AT5G37820.2 | Thale cress | plastid | 63.3 | 52.98 |
| CDX99689 | Canola | extracellular | 32.58 | 51.48 |
| PGSC0003DMT400078773 | Potato | cytoskeleton, cytosol, plasma membrane | 50.94 | 50.94 |
| Solyc02g091420.2.1 | Tomato | plasma membrane | 49.81 | 49.81 |
| KRH73019 | Soybean | cytosol, peroxisome, plasma membrane | 43.45 | 44.44 |
| KRH15118 | Soybean | plasma membrane | 43.45 | 44.44 |
| Solyc02g063310.2.1 | Tomato | cytosol, extracellular, vacuole | 21.72 | 42.34 |
| CDX78905 | Canola | cytosol, peroxisome, plasma membrane | 40.07 | 36.03 |
| CDX98596 | Canola | cytosol, peroxisome, plasma membrane | 39.7 | 35.57 |
| CDY01565 | Canola | cytosol, peroxisome, plasma membrane | 39.7 | 35.57 |
| CDX99411 | Canola | cytosol, peroxisome, plasma membrane | 38.95 | 35.02 |
| CDY35532 | Canola | endoplasmic reticulum, extracellular, vacuole | 32.21 | 30.61 |
| CDY41749 | Canola | plasma membrane | 33.33 | 30.07 |
| CDY35531 | Canola | vacuole | 34.83 | 29.71 |
| CDY29921 | Canola | vacuole | 34.46 | 29.21 |
| CDY17241 | Canola | cytosol, plasma membrane, plastid, vacuole | 30.71 | 28.67 |
| CDX84320 | Canola | extracellular, plasma membrane, plastid, vacuole | 30.34 | 28.32 |
| CDY17243 | Canola | extracellular, plasma membrane, plastid, vacuole | 29.59 | 27.62 |
| CDX84321 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 29.59 | 27.62 |
| CDX84114 | Canola | plasma membrane | 34.46 | 27.54 |
| CDY29922 | Canola | peroxisome, plasma membrane, vacuole | 32.21 | 26.22 |
| CDY05231 | Canola | plasma membrane | 26.59 | 26.1 |
| CDY27709 | Canola | plasma membrane | 26.59 | 26.1 |
| CDY16269 | Canola | plastid | 6.74 | 25.0 |
| CDY51581 | Canola | plastid | 6.74 | 25.0 |
| CDY39946 | Canola | cytosol, peroxisome, plasma membrane | 28.46 | 24.92 |
| CDX87340 | Canola | cytosol, peroxisome, plasma membrane | 28.46 | 24.92 |
| CDY53224 | Canola | cytosol, peroxisome, plasma membrane | 28.09 | 24.59 |
| CDY05100 | Canola | plasma membrane | 27.34 | 24.25 |
| CDX67591 | Canola | plasma membrane | 27.34 | 24.25 |
| CDX90757 | Canola | plasma membrane | 27.34 | 24.25 |
| CDX94261 | Canola | plasma membrane | 27.34 | 24.25 |
| CDY25253 | Canola | plasma membrane | 27.34 | 24.25 |
| CDY66949 | Canola | cytosol, peroxisome, plasma membrane | 27.34 | 23.93 |
| CDY72002 | Canola | plastid | 7.12 | 22.35 |
| CDY35528 | Canola | cytosol | 9.36 | 18.52 |
| VIT_14s0006g01560.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 4.49 | 10.26 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:35.1 | GO:A0A078JW65 | UniProt:A0A078JW65 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr |
| EnsemblPlants:CDY69767 | ProteinID:CDY69767 | ProteinID:CDY69767.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 |
| EnsemblPlantsGene:GSBRNA2T00092162001 | InterPro:IPR023271 | InterPro:MIP | PFAM:PF00230 | PRINTS:PR00783 | PANTHER:PTHR19139 |
| PANTHER:PTHR19139:SF185 | SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI0004EEF620 | SEG:seg | : |
Description
BnaCnng65250DBnaCnng65250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JW65]
Coordinates
chrLK040263:+:1726..3745
Molecular Weight (calculated)
29267.5 Da
IEP (calculated)
8.150
GRAVY (calculated)
0.258
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSHGEGIEE EQISRIEKGI EKDCHGGIET IICTCPSIVC LAQKVENELI GTYFIIFSGC GVVVVNVLYG GKVTFPGICV TWVFCPPLLI VMVMTYSVGH
101: ISGAHFNPAV TICFAIFRRF PWYQVPSYIG AQLAGSLLAS LTLRLMFKVT AEAFFGTTPA DSAARVLSCD RRISWNCGRD DNNIERLCSR TDIWSINESS
201: KKSRTSYCMG VYKGIWVYIV GPIIGIVAGG FVYNFIRFTD KPLGELTKSS SFLRKASGNN NASSSNS
101: ISGAHFNPAV TICFAIFRRF PWYQVPSYIG AQLAGSLLAS LTLRLMFKVT AEAFFGTTPA DSAARVLSCD RRISWNCGRD DNNIERLCSR TDIWSINESS
201: KKSRTSYCMG VYKGIWVYIV GPIIGIVAGG FVYNFIRFTD KPLGELTKSS SFLRKASGNN NASSSNS
001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR
Arabidopsis Description
NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [golgi,peroxisome,vacuole]
SUBAcon: [golgi,peroxisome,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.