Factsheet for Bra025435.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 4
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025436.1-P	Field mustard	plastid	99.39	82.74
CDY69767	Canola	plasma membrane	79.27	48.69
Bra025437.1-P	Field mustard	plasma membrane	81.71	48.55
Bra028151.1-P	Field mustard	plasma membrane	77.44	44.88
AT5G37820.2	Thale cress	plastid	80.49	41.38
PGSC0003DMT400078773	Potato	cytoskeleton, cytosol, plasma membrane	67.07	41.2
Solyc02g091420.2.1	Tomato	plasma membrane	66.46	40.82
KRH15118	Soybean	plasma membrane	55.49	34.87
KRH73019	Soybean	cytosol, peroxisome, plasma membrane	54.88	34.48
Bra013361.1-P	Field mustard	cytosol, peroxisome, plasma membrane	56.71	31.31
Bra012567.1-P	Field mustard	cytosol, peroxisome, plasma membrane	56.1	30.87
Solyc02g063310.2.1	Tomato	cytosol, extracellular, vacuole	21.95	26.28
Bra035520.1-P	Field mustard	plasma membrane	51.22	26.01
Bra005428.1-P	Field mustard	extracellular, plasma membrane, plastid, vacuole	43.9	25.17
Bra005430.1-P	Field mustard	cytosol, plasma membrane, plastid, vacuole	43.29	24.74
Bra033867.1-P	Field mustard	vacuole	50.61	24.63
Bra020777.1-P	Field mustard	plasma membrane	40.24	24.26
Bra000710.1-P	Field mustard	plasma membrane	43.29	23.59
Bra033181.1-P	Field mustard	plasma membrane	42.68	23.26
Bra035156.1-P	Field mustard	cytosol, peroxisome, plasma membrane	42.07	22.62
Bra008442.1-P	Field mustard	cytosol, peroxisome, plasma membrane	42.07	22.62
VIT_14s0006g01560.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	15.85	22.22

Protein Annotations

Gene3D:1.20.1080.10	MapMan:35.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra025435	EnsemblPlants:Bra025435.1
EnsemblPlants:Bra025435.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	UniProt:M4E9H9
InterPro:MIP	PFAM:PF00230	PRINTS:PR00783	PANTHER:PTHR19139	PANTHER:PTHR19139:SF185	SUPFAM:SSF81338
TMHMM:TMhelix	UniParc:UPI0002543883	SEG:seg	:	:	:

Description

AT5G37810 (E=2e-030) NIP4;1, NLM4 | NIP4;1 (NOD26-LIKE INTRINSIC PROTEIN 4;1); water channel

Coordinates

chrA04:+:8749139..8750042

Molecular Weight (calculated)

17560.5 Da

IEP (calculated)

10.320

GRAVY (calculated)

0.563

Length

164 amino acids

Sequence
(BLAST)

001: MVMIYSVGHI SGAHFNPAVT ICFAIFRRFP WYQVPSYIGA QLAGSLLASL TLRLMFKVTP EAFFGTTPAD SAARALASEI IISFLLIPIS GASMNPARSL
101: GPAIVMGVYK GIWVYIVGPI IGIVAGGFVY NFIRFTDKPI GELTKSSSFL RKASSNNNAS SSNS

Best Arabidopsis Sequence Match ( AT4G18910.1 )
(BLAST)

001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR

Arabidopsis Description

NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.