Factsheet for Bra025436.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 4
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025435.1-P	Field mustard	plastid	82.74	99.39
Bra025437.1-P	Field mustard	plasma membrane	84.26	60.14
Bra028151.1-P	Field mustard	plasma membrane	80.2	55.83
AT5G37820.2	Thale cress	plastid	83.76	51.72
PGSC0003DMT400078773	Potato	cytoskeleton, cytosol, plasma membrane	70.05	51.69
Solyc02g091420.2.1	Tomato	plasma membrane	69.54	51.31
KRH73019	Soybean	cytosol, peroxisome, plasma membrane	58.38	44.06
KRH15118	Soybean	plasma membrane	58.38	44.06
Bra013361.1-P	Field mustard	cytosol, peroxisome, plasma membrane	60.41	40.07
Bra012567.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.9	39.6
VIT_14s0006g01560.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	21.83	36.75
Bra035520.1-P	Field mustard	plasma membrane	52.79	32.2
Bra000710.1-P	Field mustard	plasma membrane	47.72	31.23
Bra033181.1-P	Field mustard	plasma membrane	47.21	30.9
Bra005428.1-P	Field mustard	extracellular, plasma membrane, plastid, vacuole	44.16	30.42
Bra035156.1-P	Field mustard	cytosol, peroxisome, plasma membrane	46.7	30.16
Bra008442.1-P	Field mustard	cytosol, peroxisome, plasma membrane	46.7	30.16
Bra033867.1-P	Field mustard	vacuole	51.27	29.97
Bra005430.1-P	Field mustard	cytosol, plasma membrane, plastid, vacuole	43.65	29.97
Solyc02g063310.2.1	Tomato	cytosol, extracellular, vacuole	19.29	27.74
Bra020777.1-P	Field mustard	plasma membrane	38.07	27.57

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra025436	EnsemblPlants:Bra025436.1
EnsemblPlants:Bra025436.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	UniProt:M4E9I0
InterPro:MIP	PFAM:PF00230	PRINTS:PR00783	PANTHER:PTHR19139	PANTHER:PTHR19139:SF185	SUPFAM:SSF81338
TMHMM:TMhelix	UniParc:UPI0002543882	SEG:seg	:	:	:

Description

AT5G37810 (E=6e-069) NIP4;1, NLM4 | NIP4;1 (NOD26-LIKE INTRINSIC PROTEIN 4;1); water channel

Coordinates

chrA04:+:8742654..8743557

Molecular Weight (calculated)

20823.6 Da

IEP (calculated)

10.136

GRAVY (calculated)

0.697

Length

197 amino acids

Sequence
(BLAST)

001: MVMIYSVGHI SGAHFNPAVT ICFAIFRRFP WYQVPSYIGA QLAGSLLASL TLRLMFKVTP EAFFGTTPAD SAARALASEI IISFLLMFVI SGVATDSRAI
101: GELAGIAVGM TIILNVFVAG PISGASMNPA RSLGPAIVMG VYKGIWVYIV GPIIGIVAGG FVYNFIRFTD KPIGELTKSS SFLRKASSNN NASSSNS

Best Arabidopsis Sequence Match ( AT5G37810.1 )
(BLAST)

001: MSSHSDEIEE EQISRIEKGK GKDCQGGIET VICTSPSIVC LTQKLIAEMI GTYFIVFSGC GVVVVNVLYG GTITFPGICV TWGLIVMVMI YSTGHISGAH
101: FNPAVTVTFA IFRRFPWHQV PLYIGAQFAG SLLASLTLRL MFKVTPEAFF GTTPADSPAR ALVAEIIISF LLMFVISGVA TDNRAVGELA GIAVGMTIMV
201: NVFVAGPISG ASMNPARSLG PALVMGVYKH IWVYIVGPVL GVISGGFVYN LIRFTDKPLR ELTKSASFLR AVSPSHKGSS SKT

Arabidopsis Description

NIP4-1Putative aquaporin NIP4-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIZ9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.