Factsheet for Bra025437.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71538	Canola	extracellular, plasma membrane, vacuole	81.88	99.12
CDX99689	Canola	extracellular	57.61	94.08
Bra025436.1-P	Field mustard	plastid	60.14	84.26
Bra028151.1-P	Field mustard	plasma membrane	84.78	82.69
Bra025435.1-P	Field mustard	plastid	48.55	81.71
PGSC0003DMT400078773	Potato	cytoskeleton, cytosol, plasma membrane	68.48	70.79
Solyc02g091420.2.1	Tomato	plasma membrane	66.67	68.91
KRH73019	Soybean	cytosol, peroxisome, plasma membrane	59.42	62.84
KRH15118	Soybean	plasma membrane	58.7	62.07
Bra012567.1-P	Field mustard	cytosol, peroxisome, plasma membrane	52.54	48.66
Bra013361.1-P	Field mustard	cytosol, peroxisome, plasma membrane	52.17	48.48
Solyc02g063310.2.1	Tomato	cytosol, extracellular, vacuole	22.46	45.26
Bra035520.1-P	Field mustard	plasma membrane	46.38	39.63
VIT_14s0006g01560.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	16.67	39.32
Bra000710.1-P	Field mustard	plasma membrane	42.03	38.54
Bra033181.1-P	Field mustard	plasma membrane	41.67	38.21
Bra008442.1-P	Field mustard	cytosol, peroxisome, plasma membrane	42.03	38.03
Bra035156.1-P	Field mustard	cytosol, peroxisome, plasma membrane	42.03	38.03
Bra005428.1-P	Field mustard	extracellular, plasma membrane, plastid, vacuole	39.13	37.76
Bra005430.1-P	Field mustard	cytosol, plasma membrane, plastid, vacuole	39.13	37.63
Bra033867.1-P	Field mustard	vacuole	44.93	36.8
Bra020777.1-P	Field mustard	plasma membrane	34.06	34.56

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra025437	EnsemblPlants:Bra025437.1
EnsemblPlants:Bra025437.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	UniProt:M4E9I1
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF185	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI0002543881	SEG:seg

Description

AT5G37810 (E=2e-114) NIP4;1, NLM4 | NIP4;1 (NOD26-LIKE INTRINSIC PROTEIN 4;1); water channel

Coordinates

chrA04:+:8733761..8736141

Molecular Weight (calculated)

29605.6 Da

IEP (calculated)

7.852

GRAVY (calculated)

0.639

Length

276 amino acids

Sequence
(BLAST)

001: MTSNGEEIEE EEISRIEKGQ AKNCHGGIET VICTSPSIVC LTQKLIAEMI GTYFVIFSGC GVVVVNVLYG GTVTFPGVCV TWGLIVMVMI YSTGHISGAH
101: FNPAVTLTFA IFRRFPWYQV PLYVGAQLAG SLLASLTIRL MFKVTPEAYF GTTPTDSAAR ALVAEIIISF LLMFVISGVS TDSRAIGELA GIAVGMTIML
201: NVFVAGPISG ASMNPARSLG PAIVMGVYKD IWVYIVGPIS GVMAGGFVYN FIRFTDKPLR ELTKSASFLR SISPKQ

Best Arabidopsis Sequence Match ( AT5G37810.1 )
(BLAST)

001: MSSHSDEIEE EQISRIEKGK GKDCQGGIET VICTSPSIVC LTQKLIAEMI GTYFIVFSGC GVVVVNVLYG GTITFPGICV TWGLIVMVMI YSTGHISGAH
101: FNPAVTVTFA IFRRFPWHQV PLYIGAQFAG SLLASLTLRL MFKVTPEAFF GTTPADSPAR ALVAEIIISF LLMFVISGVA TDNRAVGELA GIAVGMTIMV
201: NVFVAGPISG ASMNPARSLG PALVMGVYKH IWVYIVGPVL GVISGGFVYN LIRFTDKPLR ELTKSASFLR AVSPSHKGSS SKT

Arabidopsis Description

NIP4-1Putative aquaporin NIP4-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIZ9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.