CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15118	Soybean	plasma membrane	92.72	92.72
PGSC0003DMT400078773	Potato	cytoskeleton, cytosol, plasma membrane	67.05	65.54
CDY71538	Canola	extracellular, plasma membrane, vacuole	56.7	64.91
VIT_14s0006g01540.t01	Wine grape	plasma membrane	69.35	64.41
Solyc02g091420.2.1	Tomato	plasma membrane	65.13	63.67
Bra025437.1-P	Field mustard	plasma membrane	62.84	59.42
Bra025436.1-P	Field mustard	plastid	44.06	58.38
Bra028151.1-P	Field mustard	plasma membrane	63.22	58.3
CDX74558	Canola	plasma membrane	63.22	58.3
CDY01700	Canola	plasma membrane	62.84	57.95
CDX99689	Canola	extracellular	37.16	57.4
CDY65403	Canola	plasma membrane	61.69	56.89
AT5G37810.1	Thale cress	plasma membrane	61.69	56.89
CDX99688	Canola	plasma membrane	61.3	56.54
Bra025435.1-P	Field mustard	plastid	34.48	54.88
KRH50367	Soybean	plasma membrane	54.02	53.82
AT5G37820.2	Thale cress	plastid	62.07	50.78
KRH59035	Soybean	plasma membrane	50.57	48.71
KRH42923	Soybean	extracellular	49.04	47.23
KRH11076	Soybean	cytosol	49.04	46.89
KRH21197	Soybean	cytosol, peroxisome, plasma membrane	49.04	46.89
Solyc02g063310.2.1	Tomato	cytosol, extracellular, vacuole	24.52	46.72
KRH42926	Soybean	plasma membrane	49.04	46.72
KRH59036	Soybean	plasma membrane	48.28	46.67
CDY69767	Canola	plasma membrane	44.44	43.45
KRH15764	Soybean	endoplasmic reticulum, extracellular, plastid, vacuole	16.86	42.31
KRH45251	Soybean	extracellular	14.18	40.66
KRH47396	Soybean	plasma membrane	28.35	40.44
KRH47366	Soybean	cytosol, plasma membrane, vacuole	32.57	39.17
KRH47369	Soybean	mitochondrion, plastid	26.44	37.5
KRH09661	Soybean	plasma membrane, plastid	43.3	37.17
KRH16737	Soybean	cytosol, peroxisome, vacuole	37.16	35.93
KRH40096	Soybean	plastid	38.7	34.47
KRH44534	Soybean	plastid	40.23	34.31
KRH01175	Soybean	plastid	38.7	34.24
KRH35064	Soybean	plastid	38.7	33.78
KRG91709	Soybean	plastid	31.42	32.16
KRH32130	Soybean	plasma membrane	33.72	31.88
KRH71310	Soybean	plasma membrane	36.02	31.76
KRH18910	Soybean	plasma membrane	29.5	30.68

Protein Annotations

Gene3D:1.20.1080.10	EntrezGene:100803763	MapMan:24.3.1.1	EMBL:ACUP02001262	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
EnsemblPlantsGene:GLYMA_02G246700	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0015250	GO:GO:0015267
GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	InterPro:IPR023271	UniProt:K7KAK5
EnsemblPlants:KRH73019	ProteinID:KRH73019	ProteinID:KRH73019.1	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230
PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF181	SUPFAM:SSF81338	TIGRFAMs:TIGR00861
TMHMM:TMhelix	UniParc:UPI000233792B	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:43465963..43468829

Molecular Weight (calculated)

27620.0 Da

IEP (calculated)

7.850

GRAVY (calculated)

0.675

Length

261 amino acids

Sequence
(BLAST)

001: MAAKSEGIQE EEMSSMEEGV SSPSSSRTCS MSHNCCSNVV TLAQKVMAEV IGTYFVVFAG CGSVAVNKIY GSVTFPGVCV TWGLIVMVMI YSLRRISGAH
101: FNPAVTITLA IFRRFSYKEV PLYIFAQLLG SILASGTLAL MLDVTPKAYF GTVPVGSNGQ SLVAEIIITF LLMFVISAVS TDDRAVGDFA GVAVGMTIML
201: NVFIAGPVSG ASMNPARSIG PALIKHVYKG LWVYVVGPVV GSIAGALAYY FLRSIDKSSS E

Best Arabidopsis Sequence Match ( AT5G37820.2 )
(BLAST)

001: MYKSSSTSKF STHQKFQFLF YFSPNKKLTS TFFLKKMTSH GEEIEDEQIS RIEKGNCKDS QGGMETAICS SPSIVCLTQK LIAEMIGTYF IIFSGCGVVV
101: VNVLYGGTIT FPGICVTWGL IVMVMIYSTG HISGAHFNPA VTVTFAVFRR FPWYQVPLYI GAQLTGSLLA SLTLRLMFNV TPKAFFGTTP TDSSGQALVA
201: EIIISFLLMF VISGVATDSR ATGELAGIAV GMTIILNVFV AGPISGASMN PARSLGPAIV MGRYKGIWVY IVGPFVGIFA GGFVYNFMRF TDKPLRELTK
301: SASFLRSVAQ KDNASKSDG

Arabidopsis Description

NIP4;2NOD26-like intrinsic protein 4;2 [Source:TAIR;Acc:AT5G37820]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.