CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
plasma membrane 4
vacuole 3
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane, vacuole
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P00710_001	Banana	endoplasmic reticulum, extracellular, vacuole	42.37	59.04
KRH15118	Soybean	plasma membrane	54.2	54.41
KRH73019	Soybean	cytosol, peroxisome, plasma membrane	53.82	54.02
PGSC0003DMT400078337	Potato	plasma membrane	55.73	53.68
Solyc05g008080.1.1	Tomato	plasma membrane	55.34	53.31
KRH59036	Soybean	plasma membrane	54.2	52.59
KRH42923	Soybean	extracellular	53.05	51.29
KRH59035	Soybean	plasma membrane	53.05	51.29
KRH42926	Soybean	plasma membrane	53.05	50.73
KRH21197	Soybean	cytosol, peroxisome, plasma membrane	51.53	49.45
KRH11076	Soybean	cytosol	51.15	49.08
KRH45251	Soybean	extracellular	16.79	48.35
KRH15764	Soybean	endoplasmic reticulum, extracellular, plastid, vacuole	17.56	44.23
KRH47396	Soybean	plasma membrane	27.48	39.34
KRH47366	Soybean	cytosol, plasma membrane, vacuole	30.92	37.33
KRH47369	Soybean	mitochondrion, plastid	25.57	36.41
KRH16737	Soybean	cytosol, peroxisome, vacuole	37.4	36.3
KRH09661	Soybean	plasma membrane, plastid	40.08	34.54
KRH40096	Soybean	plastid	38.17	34.13
KRH01175	Soybean	plastid	37.79	33.56
KRH35064	Soybean	plastid	38.17	33.44
KRG91709	Soybean	plastid	32.44	33.33
KRH18910	Soybean	plasma membrane	31.68	33.07
KRH44534	Soybean	plastid	37.79	32.35
KRH32130	Soybean	plasma membrane	30.92	29.35
KRH71310	Soybean	plasma membrane	31.3	27.7

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	EMBL:ACUP02004685	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:GLYMA_07G217700
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887
GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020
GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	UniProt:I1KM46	InterPro:IPR023271	EnsemblPlants:KRH50367
ProteinID:KRH50367	ProteinID:KRH50367.1	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783
ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF185	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix
UniParc:UPI000233864B	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:39021235..39024295

Molecular Weight (calculated)

28140.7 Da

IEP (calculated)

8.037

GRAVY (calculated)

0.752

Length

262 amino acids

Sequence
(BLAST)

001: MEENGGNIHA DSTFCGSPAV VQVIQKVIAE LIGTYFLIFA GCCSVIINNA EETKGRITFP GICLVWGFSV TILVYSLAHV SGAHFNPAVT LSFAIYRHFP
101: LRLVPLYFIA QVLGSFLASG TLYLLFEVNE KTYFGTIPSG SYIQSLVFEI LTSFLLMFVV CAVSTDNRAI GKLGGIAVGM TIIVNVFIAG PISGASMNPA
201: RSLGPALVMW VYNGIWIYVV GPFVGAILGA TCYNLIRYTD KPLREIGASS KIFKTSACTS AT

Best Arabidopsis Sequence Match ( AT5G37810.1 )
(BLAST)

001: MSSHSDEIEE EQISRIEKGK GKDCQGGIET VICTSPSIVC LTQKLIAEMI GTYFIVFSGC GVVVVNVLYG GTITFPGICV TWGLIVMVMI YSTGHISGAH
101: FNPAVTVTFA IFRRFPWHQV PLYIGAQFAG SLLASLTLRL MFKVTPEAFF GTTPADSPAR ALVAEIIISF LLMFVISGVA TDNRAVGELA GIAVGMTIMV
201: NVFVAGPISG ASMNPARSLG PALVMGVYKH IWVYIVGPVL GVISGGFVYN LIRFTDKPLR ELTKSASFLR AVSPSHKGSS SKT

Arabidopsis Description

NIP4-1Putative aquaporin NIP4-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIZ9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.