Factsheet for Solyc05g008080.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400078337	Potato	plasma membrane	95.96	95.96
GSMUA_Achr9P00710_001	Banana	endoplasmic reticulum, extracellular, vacuole	48.9	70.74
Solyc02g091420.2.1	Tomato	plasma membrane	62.5	63.67
Solyc03g005980.2.1	Tomato	plasma membrane	57.72	56.68
Solyc02g071920.2.1	Tomato	plasma membrane	59.19	55.52
KRH50367	Soybean	plasma membrane	53.31	55.34
Solyc02g063310.2.1	Tomato	cytosol, extracellular, vacuole	23.53	46.72
Solyc03g013340.2.1	Tomato	cytosol	44.12	42.4
Solyc12g057050.1.1	Tomato	extracellular, peroxisome, vacuole	40.44	42.31
Solyc06g073590.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	51.47	40.58
Solyc02g071910.1.1	Tomato	endoplasmic reticulum, extracellular	30.51	35.93
Solyc03g117050.2.1	Tomato	plasma membrane	40.07	35.62
Solyc08g013730.2.1	Tomato	cytosol, plasma membrane, plastid	38.24	35.25
Solyc01g079890.2.1	Tomato	plasma membrane	35.29	33.8

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833
GO:GO:0008150	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220
GO:GO:0055085	InterPro:IPR023271	UniProt:K4BWY2	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230
PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF181	SUPFAM:SSF81338	EnsemblPlantsGene:Solyc05g008080.1
EnsemblPlants:Solyc05g008080.1.1	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI000276608F	SEG:seg	:

Description

No Description!

Coordinates

chr5:+:2503662..2506273

Molecular Weight (calculated)

29274.4 Da

IEP (calculated)

8.199

GRAVY (calculated)

0.662

Length

272 amino acids

Sequence
(BLAST)

001: MSTKDIREIE EGNCSNYTNN VSGDDSSLCT SPEVVIIIQK VIAEAIGTYF LIFVGCGAVA VDKTYGSVTF PGICVAWGLI VMVMVYSVGH ISGAHFNPAV
101: TIAFALFRHF PVKQVPLYIM AQMVGAILGS GTLYLLLDLK TQAFFGTTPV GTNLQSLILE FIISYLLMFV ISGVATDNRS IGELAGIAIG MTILLNVLIA
201: GPVSGASMNP ARSIGPAIVM HHYKGLWVYI IGPILGTICG AFTYNLIRFT EKPLRELTLT KTSTFLKSMS RK

Best Arabidopsis Sequence Match ( AT5G37820.2 )
(BLAST)

001: MYKSSSTSKF STHQKFQFLF YFSPNKKLTS TFFLKKMTSH GEEIEDEQIS RIEKGNCKDS QGGMETAICS SPSIVCLTQK LIAEMIGTYF IIFSGCGVVV
101: VNVLYGGTIT FPGICVTWGL IVMVMIYSTG HISGAHFNPA VTVTFAVFRR FPWYQVPLYI GAQLTGSLLA SLTLRLMFNV TPKAFFGTTP TDSSGQALVA
201: EIIISFLLMF VISGVATDSR ATGELAGIAV GMTIILNVFV AGPISGASMN PARSLGPAIV MGRYKGIWVY IVGPFVGIFA GGFVYNFMRF TDKPLRELTK
301: SASFLRSVAQ KDNASKSDG

Arabidopsis Description

NIP4;2NOD26-like intrinsic protein 4;2 [Source:TAIR;Acc:AT5G37820]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.