Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400073240 | Potato | cytosol, plasma membrane, vacuole | 39.39 | 50.28 |
| Solyc03g005980.2.1 | Tomato | plasma membrane | 43.29 | 36.1 |
| Solyc02g071920.2.1 | Tomato | plasma membrane | 42.86 | 34.14 |
| Solyc02g091420.2.1 | Tomato | plasma membrane | 38.1 | 32.96 |
| Solyc05g008080.1.1 | Tomato | plasma membrane | 35.93 | 30.51 |
| KXG20157 | Sorghum | golgi, nucleus, plasma membrane | 38.1 | 30.24 |
| TraesCS7D01G367800.1 | Wheat | golgi, peroxisome, plasma membrane | 36.36 | 30.11 |
| TraesCS7B01G272700.1 | Wheat | plasma membrane | 36.36 | 30.11 |
| Bra005428.1-P | Field mustard | extracellular, plasma membrane, plastid, vacuole | 37.23 | 30.07 |
| CDX84320 | Canola | extracellular, plasma membrane, plastid, vacuole | 37.23 | 30.07 |
| Os06t0552700-01 | Rice | cytosol, peroxisome, plastid | 35.5 | 30.04 |
| Solyc02g063310.2.1 | Tomato | cytosol, extracellular, vacuole | 17.75 | 29.93 |
| CDY17243 | Canola | extracellular, plasma membrane, plastid, vacuole | 36.8 | 29.72 |
| CDY35532 | Canola | endoplasmic reticulum, extracellular, vacuole | 35.93 | 29.54 |
| AT2G34390.1 | Thale cress | plasma membrane | 36.8 | 29.51 |
| CDY41749 | Canola | plasma membrane | 37.66 | 29.39 |
| TraesCS7A01G355000.1 | Wheat | peroxisome | 35.5 | 29.39 |
| CDY17241 | Canola | cytosol, plasma membrane, plastid, vacuole | 36.36 | 29.37 |
| CDX84321 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 36.36 | 29.37 |
| Solyc03g013340.2.1 | Tomato | cytosol | 35.93 | 29.33 |
| Bra005430.1-P | Field mustard | cytosol, plasma membrane, plastid, vacuole | 35.93 | 28.92 |
| CDY35528 | Canola | cytosol | 16.45 | 28.15 |
| Solyc06g073590.2.1 | Tomato | endoplasmic reticulum, peroxisome, plasma membrane | 41.99 | 28.12 |
| Solyc12g057050.1.1 | Tomato | extracellular, peroxisome, vacuole | 31.17 | 27.69 |
| CDY29921 | Canola | vacuole | 37.66 | 27.62 |
| CDY35531 | Canola | vacuole | 37.23 | 27.48 |
| AT2G29870.1 | Thale cress | plastid | 16.45 | 27.34 |
| Bra035520.1-P | Field mustard | plasma membrane | 38.1 | 27.24 |
| AT1G31885.1 | Thale cress | vacuole | 38.1 | 27.24 |
| CDX84114 | Canola | plasma membrane | 38.1 | 26.35 |
| Zm00001d046303_P001 | Maize | golgi, peroxisome, plasma membrane | 35.5 | 25.87 |
| Bra033867.1-P | Field mustard | vacuole | 37.23 | 25.52 |
| Solyc01g079890.2.1 | Tomato | plasma membrane | 31.17 | 25.35 |
| Solyc08g013730.2.1 | Tomato | cytosol, plasma membrane, plastid | 30.74 | 24.07 |
| CDY29922 | Canola | peroxisome, plasma membrane, vacuole | 32.03 | 22.56 |
| Solyc03g117050.2.1 | Tomato | plasma membrane | 29.87 | 22.55 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:35.1 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 | GO:GO:0006833 |
| GO:GO:0008150 | GO:GO:0015250 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 |
| GO:GO:0055085 | InterPro:IPR023271 | UniProt:K4B8G6 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 |
| PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF144 | SUPFAM:SSF81338 | EnsemblPlantsGene:Solyc02g071910.1 |
| EnsemblPlants:Solyc02g071910.1.1 | TMHMM:TMhelix | UniParc:UPI00027691E1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2:-:41277013..41278265
Molecular Weight (calculated)
25453.7 Da
IEP (calculated)
9.998
GRAVY (calculated)
0.448
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNLVFSMQL VAELLGTYLS MFAGFAAMVI NKKIMMVMIY TVGPVFGAHF NPAVTVAFAS CKRVAWRNVP AYMLAQVVGA TLATVTVRLM FKEEQLQFLR
101: TILAGTAMDK QAVSDHCLFR CKDPRTEFDL FYPSLCLLMQ VGELNGHVIG AVITINSILA GPISGGSINP TRSLGPAILS NCYKKQWIYI LGPTAGATTG
201: IWFYNAMKSV KSYNEVTKFL PFLRRLAQNK V
101: TILAGTAMDK QAVSDHCLFR CKDPRTEFDL FYPSLCLLMQ VGELNGHVIG AVITINSILA GPISGGSINP TRSLGPAILS NCYKKQWIYI LGPTAGATTG
201: IWFYNAMKSV KSYNEVTKFL PFLRRLAQNK V
001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR
Arabidopsis Description
NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]
SUBAcon: [peroxisome,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.