Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72002 | Canola | plastid | 25.19 | 40.0 |
| CDY51581 | Canola | plastid | 19.26 | 36.11 |
| CDY16269 | Canola | plastid | 19.26 | 36.11 |
| CDY41749 | Canola | plasma membrane | 63.7 | 29.05 |
| CDY35532 | Canola | endoplasmic reticulum, extracellular, vacuole | 59.26 | 28.47 |
| CDX99689 | Canola | extracellular | 34.81 | 27.81 |
| CDY35531 | Canola | vacuole | 62.96 | 27.16 |
| CDY29921 | Canola | vacuole | 62.22 | 26.67 |
| AT1G31885.1 | Thale cress | vacuole | 62.22 | 26.01 |
| CDX84114 | Canola | plasma membrane | 62.96 | 25.45 |
| CDY71538 | Canola | extracellular, plasma membrane, vacuole | 35.56 | 21.05 |
| CDY29922 | Canola | peroxisome, plasma membrane, vacuole | 46.67 | 19.21 |
| TraesCS7D01G367800.1 | Wheat | golgi, peroxisome, plasma membrane | 37.04 | 17.92 |
| TraesCS7B01G272700.1 | Wheat | plasma membrane | 37.04 | 17.92 |
| TraesCS7A01G355000.1 | Wheat | peroxisome | 36.3 | 17.56 |
| CDX99688 | Canola | plasma membrane | 36.3 | 17.31 |
| CDX74558 | Canola | plasma membrane | 35.56 | 16.96 |
| CDY01700 | Canola | plasma membrane | 35.56 | 16.96 |
| CDY65403 | Canola | plasma membrane | 34.81 | 16.61 |
| CDX78905 | Canola | cytosol, peroxisome, plasma membrane | 36.3 | 16.5 |
| KXG20157 | Sorghum | golgi, nucleus, plasma membrane | 35.56 | 16.49 |
| Solyc02g071910.1.1 | Tomato | endoplasmic reticulum, extracellular | 28.15 | 16.45 |
| CDX98596 | Canola | cytosol, peroxisome, plasma membrane | 36.3 | 16.44 |
| CDY01565 | Canola | cytosol, peroxisome, plasma membrane | 36.3 | 16.44 |
| CDX99411 | Canola | cytosol, peroxisome, plasma membrane | 35.56 | 16.16 |
| Os06t0552700-01 | Rice | cytosol, peroxisome, plastid | 32.59 | 16.12 |
| Solyc06g073590.2.1 | Tomato | endoplasmic reticulum, peroxisome, plasma membrane | 40.0 | 15.65 |
| PGSC0003DMT400015246 | Potato | endoplasmic reticulum, peroxisome, plasma membrane | 39.26 | 15.27 |
| Zm00001d046303_P001 | Maize | golgi, peroxisome, plasma membrane | 35.56 | 15.14 |
| CDX84321 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 31.11 | 14.69 |
| CDX84320 | Canola | extracellular, plasma membrane, plastid, vacuole | 30.37 | 14.34 |
| CDY17243 | Canola | extracellular, plasma membrane, plastid, vacuole | 30.37 | 14.34 |
| CDY17241 | Canola | cytosol, plasma membrane, plastid, vacuole | 28.89 | 13.64 |
| CDX90757 | Canola | plasma membrane | 29.63 | 13.29 |
| CDY25253 | Canola | plasma membrane | 29.63 | 13.29 |
| CDX94261 | Canola | plasma membrane | 29.63 | 13.29 |
| CDY05100 | Canola | plasma membrane | 29.63 | 13.29 |
| CDX67591 | Canola | plasma membrane | 28.89 | 12.96 |
| CDY53224 | Canola | cytosol, peroxisome, plasma membrane | 28.15 | 12.46 |
| CDY66949 | Canola | cytosol, peroxisome, plasma membrane | 28.15 | 12.46 |
| CDX87340 | Canola | cytosol, peroxisome, plasma membrane | 27.41 | 12.13 |
| CDY39946 | Canola | cytosol, peroxisome, plasma membrane | 27.41 | 12.13 |
| CDY05231 | Canola | plasma membrane | 22.22 | 11.03 |
| CDY27709 | Canola | plasma membrane | 22.22 | 11.03 |
| CDY69767 | Canola | plasma membrane | 18.52 | 9.36 |
| PGSC0003DMT400073240 | Potato | cytosol, plasma membrane, vacuole | 8.15 | 6.08 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:35.1 | GO:A0A078HFF3 | UniProt:A0A078HFF3 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr |
| EnsemblPlants:CDY35528 | ProteinID:CDY35528 | ProteinID:CDY35528.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 |
| EnsemblPlantsGene:GSBRNA2T00058578001 | InterPro:IPR023271 | InterPro:MIP | PFAM:PF00230 | PRINTS:PR00783 | PANTHER:PTHR19139 |
| PANTHER:PTHR19139:SF155 | SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI0004EE745A | SEG:seg | : |
Description
BnaA05g16580DBnaA05g16580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HFF3]
Coordinates
chrLK032354:+:32476..33037
Molecular Weight (calculated)
15178.4 Da
IEP (calculated)
9.893
GRAVY (calculated)
-0.007
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MWERTHQILK LRSTDKRANE SFAGIAIGAT IVLDILFSGP VSGASMNPAR SLGPEYIWGC YKDLWLYIVS TVIGGLACAW TYNMLRSTNK SYGEIVRPYL
101: LYTKSNKYSV LSLSTSTYLI PQSQHLLNTR RIHVG
101: LYTKSNKYSV LSLSTSTYLI PQSQHLLNTR RIHVG
001: MIFAGCSAIV VNETYGKPVT LPGIALVWGL VVTVMIYSIG HVSGAHFNPA VSIAFASSKK FPFNQVPGYI AAQLLGSTLA AAVLRLVFHL DDDVCSLKGD
101: VYVGTYPSNS NTTSFVMEFI ATFNLMFVIS AVATDKRATG SFAGIAIGAT IVLDILFSGP ISGASMNPAR SLGPALIWGC YKDLWLYIVS PVIGALSGAW
201: TYGLLRSTKK SYSEIIRPNC NKVSSRDRQE ASQDEICVLR VVDPANQNYF ICSSPTDING KCNVTCKLA
101: VYVGTYPSNS NTTSFVMEFI ATFNLMFVIS AVATDKRATG SFAGIAIGAT IVLDILFSGP ISGASMNPAR SLGPALIWGC YKDLWLYIVS PVIGALSGAW
201: TYGLLRSTKK SYSEIIRPNC NKVSSRDRQE ASQDEICVLR VVDPANQNYF ICSSPTDING KCNVTCKLA
Arabidopsis Description
NIP3-1Aquaporin NIP3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6T0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.