Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 1
- endoplasmic reticulum 2
- plasma membrane 3
- extracellular 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g073590.2.1 | Tomato | endoplasmic reticulum, peroxisome, plasma membrane | 94.81 | 95.36 |
| PGSC0003DMT400071510 | Potato | plasma membrane | 44.09 | 55.23 |
| PGSC0003DMT400073246 | Potato | plasma membrane | 45.24 | 54.14 |
| PGSC0003DMT400078337 | Potato | plasma membrane | 40.63 | 51.84 |
| Bra005428.1-P | Field mustard | extracellular, plasma membrane, plastid, vacuole | 41.5 | 50.35 |
| CDX84320 | Canola | extracellular, plasma membrane, plastid, vacuole | 41.5 | 50.35 |
| CDY17243 | Canola | extracellular, plasma membrane, plastid, vacuole | 41.5 | 50.35 |
| CDY17241 | Canola | cytosol, plasma membrane, plastid, vacuole | 41.21 | 50.0 |
| CDX84321 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 40.92 | 49.65 |
| Bra005430.1-P | Field mustard | cytosol, plasma membrane, plastid, vacuole | 40.92 | 49.48 |
| CDY35532 | Canola | endoplasmic reticulum, extracellular, vacuole | 39.19 | 48.4 |
| CDY41749 | Canola | plasma membrane | 40.63 | 47.64 |
| AT2G34390.1 | Thale cress | plasma membrane | 39.19 | 47.22 |
| PGSC0003DMT400078773 | Potato | cytoskeleton, cytosol, plasma membrane | 36.31 | 47.19 |
| TraesCS7B01G272700.1 | Wheat | plasma membrane | 37.18 | 46.24 |
| TraesCS7D01G367800.1 | Wheat | golgi, peroxisome, plasma membrane | 37.18 | 46.24 |
| KXG20157 | Sorghum | golgi, nucleus, plasma membrane | 38.33 | 45.7 |
| TraesCS7A01G355000.1 | Wheat | peroxisome | 36.6 | 45.52 |
| PGSC0003DMT400022061 | Potato | peroxisome, plasma membrane, plastid, vacuole | 34.01 | 45.38 |
| AT1G31885.1 | Thale cress | vacuole | 41.79 | 44.89 |
| Bra035520.1-P | Field mustard | plasma membrane | 41.5 | 44.58 |
| Os06t0552700-01 | Rice | cytosol, peroxisome, plastid | 34.29 | 43.59 |
| CDX84114 | Canola | plasma membrane | 41.5 | 43.11 |
| PGSC0003DMT400073240 | Potato | cytosol, plasma membrane, vacuole | 22.19 | 42.54 |
| AT2G29870.1 | Thale cress | plastid | 17.0 | 42.45 |
| Bra033867.1-P | Field mustard | vacuole | 40.63 | 41.84 |
| CDY35531 | Canola | vacuole | 36.89 | 40.89 |
| CDY29921 | Canola | vacuole | 36.6 | 40.32 |
| Zm00001d046303_P001 | Maize | golgi, peroxisome, plasma membrane | 36.6 | 40.06 |
| PGSC0003DMT400014852 | Potato | cytosol, plasma membrane, plastid | 34.01 | 39.86 |
| CDY29922 | Canola | peroxisome, plasma membrane, vacuole | 37.18 | 39.33 |
| CDY35528 | Canola | cytosol | 15.27 | 39.26 |
| PGSC0003DMT400036625 | Potato | plasma membrane | 32.28 | 36.6 |
| PGSC0003DMT400035638 | Potato | cytosol, golgi, plasma membrane | 13.83 | 36.36 |
| PGSC0003DMT400035640 | Potato | endoplasmic reticulum, extracellular | 16.43 | 32.02 |
| PGSC0003DMT400084932 | Potato | plasma membrane | 25.94 | 31.36 |
Protein Annotations
| Gene3D:1.20.1080.10 | EntrezGene:102596712 | MapMan:24.3.1.1 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR023271 | UniProt:M1A5P5 | InterPro:MIP | InterPro:MIP_CS |
| PFAM:PF00230 | EnsemblPlantsGene:PGSC0003DMG401005949 | PGSC:PGSC0003DMG401005949 | EnsemblPlants:PGSC0003DMT400015246 | PRINTS:PR00783 | ScanProsite:PS00221 |
| PANTHER:PTHR19139 | PANTHER:PTHR19139:SF155 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | UniParc:UPI0002953D30 |
| RefSeq:XP_015170605.1 | : | : | : | : | : |
Description
Aquaporin NIP1;1 [Source:PGSC_GENE;Acc:PGSC0003DMG401005949]
Coordinates
chr6:+:54199558..54201712
Molecular Weight (calculated)
37715.4 Da
IEP (calculated)
8.316
GRAVY (calculated)
0.385
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEIPEIEGI RSTSLRINDC PSPLPSAITT SATPQKHLKC FMSVHFVQKL IAEFVGTYML IFAGCAAIIL NINKNNVVTL PGIASVWGLV VMVLIYSVGH
101: VSGAHFNPAV TIAFATSKMF PWIQVPAYIL VQVVGSILAS GSLRLIFNGK EDQFVGTVPA GTNLQALILE FIATFYLMFV IAGVATDDRA MKHLSGVAIG
201: ATVSLDILFS GPLTGASMNP ARSLGPAIVT GHYKGLWIYI IGPTLGAIFG AWTYNLMRLK NKSWGEAVKE LSHSQKAIEV SSKDKVICNC GEGWSCVVSK
301: TEEAEVGNIF FECAEGCLCI VDETNTLKKH VYVYEKTKRR KSYKMHI
101: VSGAHFNPAV TIAFATSKMF PWIQVPAYIL VQVVGSILAS GSLRLIFNGK EDQFVGTVPA GTNLQALILE FIATFYLMFV IAGVATDDRA MKHLSGVAIG
201: ATVSLDILFS GPLTGASMNP ARSLGPAIVT GHYKGLWIYI IGPTLGAIFG AWTYNLMRLK NKSWGEAVKE LSHSQKAIEV SSKDKVICNC GEGWSCVVSK
301: TEEAEVGNIF FECAEGCLCI VDETNTLKKH VYVYEKTKRR KSYKMHI
001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR
Arabidopsis Description
NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]
SUBAcon: [peroxisome,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.