CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 1
mitochondrion 1
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plasma membrane, plastid, vacuole
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35531	Canola	vacuole	96.19	96.81
CDY35532	Canola	endoplasmic reticulum, extracellular, vacuole	67.62	75.8
CDY41749	Canola	plasma membrane	70.16	74.66
CDX84114	Canola	plasma membrane	76.83	72.46
AT1G31885.1	Thale cress	vacuole	74.29	72.45
CDY35528	Canola	cytosol	26.67	62.22
CDY29922	Canola	peroxisome, plasma membrane, vacuole	61.59	59.15
CDY71538	Canola	extracellular, plasma membrane, vacuole	33.97	46.93
CDY72002	Canola	plastid	12.38	45.88
CDY16269	Canola	plastid	9.84	43.06
CDY51581	Canola	plastid	9.84	43.06
CDX84321	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	38.73	42.66
CDX84320	Canola	extracellular, plasma membrane, plastid, vacuole	38.73	42.66
CDX99688	Canola	plasma membrane	38.1	42.4
CDY17243	Canola	extracellular, plasma membrane, plastid, vacuole	38.41	42.31
CDY17241	Canola	cytosol, plasma membrane, plastid, vacuole	38.41	42.31
CDY01700	Canola	plasma membrane	37.78	42.05
CDX74558	Canola	plasma membrane	37.78	42.05
CDY65403	Canola	plasma membrane	37.78	42.05
CDX99689	Canola	extracellular	22.54	42.01
CDX78905	Canola	cytosol, peroxisome, plasma membrane	38.73	41.08
CDY01565	Canola	cytosol, peroxisome, plasma membrane	38.73	40.94
CDX98596	Canola	cytosol, peroxisome, plasma membrane	38.73	40.94
CDX99411	Canola	cytosol, peroxisome, plasma membrane	37.14	39.39
Solyc06g073590.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	41.59	37.97
Solyc02g071910.1.1	Tomato	endoplasmic reticulum, extracellular	27.62	37.66
TraesCS7B01G272700.1	Wheat	plasma membrane	33.33	37.63
TraesCS7D01G367800.1	Wheat	golgi, peroxisome, plasma membrane	33.33	37.63
PGSC0003DMT400015246	Potato	endoplasmic reticulum, peroxisome, plasma membrane	40.32	36.6
KXG20157	Sorghum	golgi, nucleus, plasma membrane	33.65	36.43
TraesCS7A01G355000.1	Wheat	peroxisome	32.06	36.2
Os06t0552700-01	Rice	cytosol, peroxisome, plastid	31.11	35.9
CDY69767	Canola	plasma membrane	29.21	34.46
CDX67591	Canola	plasma membrane	31.75	33.22
CDY25253	Canola	plasma membrane	31.75	33.22
CDY05100	Canola	plasma membrane	31.75	33.22
CDX94261	Canola	plasma membrane	31.75	33.22
CDX90757	Canola	plasma membrane	31.75	33.22
CDY66949	Canola	cytosol, peroxisome, plasma membrane	32.06	33.11
CDY53224	Canola	cytosol, peroxisome, plasma membrane	31.75	32.79
CDY39946	Canola	cytosol, peroxisome, plasma membrane	31.75	32.79
CDX87340	Canola	cytosol, peroxisome, plasma membrane	31.75	32.79
PGSC0003DMT400073240	Potato	cytosol, plasma membrane, vacuole	18.41	32.04
Zm00001d046303_P001	Maize	golgi, peroxisome, plasma membrane	31.75	31.55
CDY27709	Canola	plasma membrane	26.98	31.25
CDY05231	Canola	plasma membrane	26.98	31.25

Protein Annotations

Gene3D:1.20.1080.10	MapMan:35.1	GO:A0A078GWK6	UniProt:A0A078GWK6	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
EnsemblPlants:CDY29921	ProteinID:CDY29921	ProteinID:CDY29921.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00044396001	InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783
ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF155	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI0004EF3DC1
SEG:seg	:	:	:	:	:

Description

BnaC05g29150DBnaC05g29150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GWK6]

Coordinates

chrLK032246:+:111961..113605

Molecular Weight (calculated)

33761.6 Da

IEP (calculated)

7.935

GRAVY (calculated)

0.213

Length

315 amino acids

Sequence
(BLAST)

001: MSKPLTFSEK SILSMAEISS ITVRTQTTIL NIEDGRSSGD PRSPDSPCSL ICISFVQKLI GEFVGTFSLV FAGCSATVVN DTYGELVTLP GIALAWGLTV
101: MVMSYSIGHV SGAHFNPAVS IALASSRKFP FKQVPGYIAA QLLGSTLAAE ALRLMFHLNN NVCSLKGDVY VGTHPSATDK RANRSFAGVA IGATVVLNIL
201: FSGPISGASM NPARSLAPAY IWGCYKDLWL YIVSPVIGAL TGAWIYNILR STNKSYGEII RPNCNKVSSN DHQEASQDDS DSCVLRVVDP NNRKFFILSS
301: PTDINETCNV TCKLA

Best Arabidopsis Sequence Match ( AT1G31885.1 )
(BLAST)

001: MAEISDITTQ TQTVVLDIEN YQSIDDSRSS DLSAPLVSVS FVQKLIGEFV GTFTMIFAGC SAIVVNETYG KPVTLPGIAL VWGLVVTVMI YSIGHVSGAH
101: FNPAVSIAFA SSKKFPFNQV PGYIAAQLLG STLAAAVLRL VFHLDDDVCS LKGDVYVGTY PSNSNTTSFV MEFIATFNLM FVISAVATDK RATGSFAGIA
201: IGATIVLDIL FSGPISGASM NPARSLGPAL IWGCYKDLWL YIVSPVIGAL SGAWTYGLLR STKKSYSEII RPNCNKVSSR DRQEASQDEI CVLRVVDPAN
301: QNYFICSSPT DINGKCNVTC KLA

Arabidopsis Description

NIP3-1Aquaporin NIP3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6T0]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.