CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 2
cytosol 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000710.1-P	Field mustard	plasma membrane	100.0	100.0
CDY72002	Canola	plastid	28.24	100.0
CDY05100	Canola	plasma membrane	98.01	98.01
CDY25253	Canola	plasma membrane	95.02	95.02
CDX94261	Canola	plasma membrane	94.68	94.68
CDX67591	Canola	plasma membrane	94.68	94.68
CDY51581	Canola	plastid	22.59	94.44
CDY16269	Canola	plastid	22.26	93.06
AT4G10380.1	Thale cress	cytosol	93.36	92.43
GSMUA_AchrUn_...	Banana	extracellular	61.13	82.51
VIT_02s0025g03260.t01	Wine grape	plastid	79.4	80.2
Solyc08g013730.2.1	Tomato	cytosol, plasma membrane, plastid	78.41	80.0
PGSC0003DMT400014852	Potato	cytosol, plasma membrane, plastid	78.41	79.73
KRH35064	Soybean	plastid	71.76	72.24
EER91378	Sorghum	plastid	71.1	71.1
KRG91709	Soybean	plastid	60.13	70.98
Zm00001d032461_P001	Maize	plastid	70.76	70.53
TraesCS1A01G177500.1	Wheat	plastid	69.1	69.33
TraesCS1D01G176000.1	Wheat	plastid	68.77	69.23
TraesCS1B01G202700.1	Wheat	plastid	68.44	69.13
Os10t0513200-01	Rice	plasma membrane	70.1	67.85
CDY39946	Canola	cytosol, peroxisome, plasma membrane	66.45	65.57
CDX87340	Canola	cytosol, peroxisome, plasma membrane	66.11	65.25
CDY53224	Canola	cytosol, peroxisome, plasma membrane	66.11	65.25
CDY66949	Canola	cytosol, peroxisome, plasma membrane	65.12	64.26
HORVU3Hr1G014440.3	Barley	golgi, mitochondrion, plasma membrane	53.82	62.79
GSMUA_Achr1P04130_001	Banana	plasma membrane	73.75	61.84
HORVU1Hr1G047100.3	Barley	plastid	60.13	49.32
CDY71538	Canola	extracellular, plasma membrane, vacuole	35.22	46.49
CDX99689	Canola	extracellular	25.58	45.56
CDX74558	Canola	plasma membrane	41.86	44.52
CDY01700	Canola	plasma membrane	41.53	44.17
CDY65403	Canola	plasma membrane	39.53	42.05
CDX99688	Canola	plasma membrane	38.87	41.34
CDY41749	Canola	plasma membrane	38.87	39.53
CDY35532	Canola	endoplasmic reticulum, extracellular, vacuole	35.88	38.43
CDX98596	Canola	cytosol, peroxisome, plasma membrane	37.54	37.92
CDY01565	Canola	cytosol, peroxisome, plasma membrane	37.54	37.92
CDX99411	Canola	cytosol, peroxisome, plasma membrane	36.88	37.37
CDX78905	Canola	cytosol, peroxisome, plasma membrane	36.88	37.37
CDX84320	Canola	extracellular, plasma membrane, plastid, vacuole	35.22	37.06
CDY17243	Canola	extracellular, plasma membrane, plastid, vacuole	34.88	36.71
CDX84321	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	34.88	36.71
CDY17241	Canola	cytosol, plasma membrane, plastid, vacuole	34.55	36.36
CDX84114	Canola	plasma membrane	40.2	36.23
CDY05231	Canola	plasma membrane	30.23	33.46
CDY27709	Canola	plasma membrane	30.23	33.46
CDY29922	Canola	peroxisome, plasma membrane, vacuole	35.55	32.62
CDY35531	Canola	vacuole	33.22	31.95
CDY29921	Canola	vacuole	33.22	31.75
CDY35528	Canola	cytosol	13.29	29.63
CDY69767	Canola	plasma membrane	24.25	27.34

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	GO:A0A078DP43	UniProt:A0A078DP43	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
EnsemblPlants:CDX90757	ProteinID:CDX90757	ProteinID:CDX90757.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00151450001	InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783
ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF159	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI0002540358
SEG:seg	:	:	:	:	:

Description

BnaA03g24370DBnaA3.NIP51 [Source:UniProtKB/TrEMBL;Acc:A0A078DP43]

Coordinates

chrLK031864:-:344301..353010

Molecular Weight (calculated)

31214.2 Da

IEP (calculated)

8.746

GRAVY (calculated)

0.532

Length

301 amino acids

Sequence
(BLAST)

001: MSPPEAEMGA VAVTAPPTPG TPGGPLITGM RVDSMSFDHR KPIPPCKCLP VMGNRWGQHD TCFADFPSPG VSLTRKLGAE FVGTFILIFT ATAGPIVNQK
101: YDGAETLIGN AACAGLAVMI IILSTGHISG AHLNPSLTIA FAALRHFPWA HVPAYIAAQV SASVCASFAL KAVFHPFMSG GVTVPSVSVG QAFALEFIIS
201: FILLFVVTAV ATDTRAVGEL AGIAVGATVM LNILVAGPST GASMNPVRTL GPALASGNYR LLWVYLVAPT LGAISGAAVY TGVKLNDNVT DPPRQVRSFR
301: R

Best Arabidopsis Sequence Match ( AT4G10380.1 )
(BLAST)

001: MAPPEAEVGA VMVMAPPTPG TPGTPGGPLI TGMRVDSMSF DHRKPTPRCK CLPVMGSTWG QHDTCFTDFP SPDVSLTRKL GAEFVGTFIL IFTATAGPIV
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR

Arabidopsis Description

NIP5-1At4g10380 [Source:UniProtKB/TrEMBL;Acc:A3KPG0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.