Factsheet for GSMUA_Achr1P04130_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	extracellular	55.99	90.13
VIT_02s0025g03260.t01	Wine grape	plastid	68.8	82.89
Solyc08g013730.2.1	Tomato	cytosol, plasma membrane, plastid	65.74	80.0
PGSC0003DMT400014852	Potato	cytosol, plasma membrane, plastid	65.46	79.39
Bra033181.1-P	Field mustard	plasma membrane	63.51	75.75
CDX94261	Canola	plasma membrane	63.51	75.75
CDY25253	Canola	plasma membrane	63.51	75.75
EER91378	Sorghum	plastid	62.67	74.75
AT4G10380.1	Thale cress	cytosol	62.95	74.34
Bra000710.1-P	Field mustard	plasma membrane	61.84	73.75
CDX90757	Canola	plasma membrane	61.84	73.75
CDY05100	Canola	plasma membrane	61.84	73.75
Zm00001d032461_P001	Maize	plastid	61.84	73.51
TraesCS1A01G177500.1	Wheat	plastid	61.28	73.33
TraesCS1D01G176000.1	Wheat	plastid	61.0	73.24
TraesCS1B01G202700.1	Wheat	plastid	60.45	72.82
KRH35064	Soybean	plastid	60.17	72.24
CDX67591	Canola	plasma membrane	60.45	72.09
Os10t0513200-01	Rice	plasma membrane	62.4	72.03
KRG91709	Soybean	plastid	50.7	71.37
CDY72002	Canola	plastid	16.43	69.41
CDY51581	Canola	plastid	12.81	63.89
HORVU3Hr1G014440.3	Barley	golgi, mitochondrion, plasma membrane	45.13	62.79
CDY16269	Canola	plastid	12.53	62.5
HORVU1Hr1G047100.3	Barley	plastid	54.6	53.41
GSMUA_Achr9P00710_001	Banana	endoplasmic reticulum, extracellular, vacuole	23.12	44.15
GSMUA_Achr6P14730_001	Banana	plasma membrane	30.64	40.59
GSMUA_Achr9P27460_001	Banana	cytosol, peroxisome, plasma membrane	31.2	37.21
GSMUA_Achr10P...	Banana	endoplasmic reticulum, peroxisome, plasma membrane	30.36	37.2
GSMUA_Achr5P23340_001	Banana	peroxisome	30.08	36.86
GSMUA_Achr6P02660_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	31.48	34.98
GSMUA_Achr10P...	Banana	cytosol, extracellular, plastid	19.22	27.38
GSMUA_Achr4P10230_001	Banana	plastid	16.43	18.79

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr1G04130_001	EnsemblPlants:GSMUA_Achr1P04130_001	EnsemblPlants:GSMUA_Achr1T04130_001	InterPro:IPR023271	UniProt:M0RWX1
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF102	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI0002956304	SEG:seg	:

Description

Aquaporin NIP3-1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G04130_001]

Coordinates

chr1:+:3443495..3452041

Molecular Weight (calculated)

38731.3 Da

IEP (calculated)

8.383

GRAVY (calculated)

0.351

Length

359 amino acids

Sequence
(BLAST)

001: MHQYLIQQIL TKNTLKPKPL AMPEPETPNV SAPATPGTPG APLFNSLRVD SLSYDRKSMP RCNRCLPLES WASSPHTCFI ELPKPDVSLT RKLGAEFVGT
101: FILIFGATAA PIVNQKYNGA ETLIGNAACA GLAVMIVILS TGHISGAHLN PSLTIAFAML RHFPWAHVPA YILAQVSASI CASFALKAVF HPFLSGGVTV
201: PSVSSPQAFF IEFLITFNLL FVVTAVATDT RAVGELAGIA VGATVMLNIL VAGPSSGGSM NPVRTLGPAV AAGNYERIWI YLVAPTAGAV TGAAVYTAVK
301: LKEEDGEMPR QQLLEDYPRH TRYALQNDSW IVASYFYLCS VKHIFFLLQM LNCEYCKLR

Best Arabidopsis Sequence Match ( AT4G10380.1 )
(BLAST)

001: MAPPEAEVGA VMVMAPPTPG TPGTPGGPLI TGMRVDSMSF DHRKPTPRCK CLPVMGSTWG QHDTCFTDFP SPDVSLTRKL GAEFVGTFIL IFTATAGPIV
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR

Arabidopsis Description

NIP5-1At4g10380 [Source:UniProtKB/TrEMBL;Acc:A3KPG0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.