Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- endoplasmic reticulum 2
- plasma membrane 3
- extracellular 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P23340_001 | Banana | peroxisome | 82.59 | 82.59 |
| GSMUA_Achr6P02660_001 | Banana | cytosol, endoplasmic reticulum, golgi, mitochondrion | 86.01 | 78.02 |
| GSMUA_Achr9P27460_001 | Banana | cytosol, peroxisome, plasma membrane | 75.09 | 73.09 |
| TraesCS6B01G335900.1 | Wheat | golgi, peroxisome, plasma membrane | 63.82 | 63.39 |
| EER89472 | Sorghum | cytosol, plasma membrane, plastid | 63.48 | 63.05 |
| TraesCS6D01G286400.1 | Wheat | golgi, peroxisome, plasma membrane | 63.48 | 63.05 |
| TraesCS6A01G307300.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 63.48 | 63.05 |
| Zm00001d052261_P001 | Maize | cytosol, plasma membrane, plastid | 45.39 | 63.03 |
| Os06t0228200-01 | Rice | plasma membrane | 63.82 | 62.75 |
| Zm00001d018037_P001 | Maize | cytosol, peroxisome, plasma membrane | 63.14 | 62.71 |
| EES07262 | Sorghum | cytosol, peroxisome, plasma membrane | 63.14 | 62.29 |
| Zm00001d037228_P001 | Maize | cytosol, plasma membrane, plastid | 62.12 | 61.9 |
| Os02t0745100-01 | Rice | plasma membrane, vacuole | 62.8 | 61.74 |
| HORVU7Hr1G038220.1 | Barley | endoplasmic reticulum, golgi, peroxisome | 63.14 | 61.67 |
| VIT_14s0108g00700.t01 | Wine grape | peroxisome | 61.77 | 61.56 |
| TraesCS7D01G188800.2 | Wheat | plasma membrane | 62.46 | 61.0 |
| TraesCS7A01G187800.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 62.46 | 61.0 |
| TraesCS7B01G092900.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 62.46 | 61.0 |
| Zm00001d044826_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 61.77 | 60.13 |
| PGSC0003DMT400035640 | Potato | endoplasmic reticulum, extracellular | 36.18 | 59.55 |
| Solyc03g013340.2.1 | Tomato | cytosol | 57.34 | 59.36 |
| HORVU0Hr1G017130.2 | Barley | endoplasmic reticulum, golgi, peroxisome | 27.65 | 54.0 |
| PGSC0003DMT400035638 | Potato | cytosol, golgi, plasma membrane | 24.23 | 53.79 |
| KRH40096 | Soybean | plastid | 49.15 | 49.15 |
| KRH01175 | Soybean | plastid | 49.15 | 48.81 |
| GSMUA_Achr9P00710_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 30.72 | 47.87 |
| HORVU6Hr1G075850.4 | Barley | nucleus, plasma membrane, vacuole | 51.54 | 47.48 |
| GSMUA_AchrUn_... | Banana | extracellular | 34.13 | 44.84 |
| GSMUA_Achr6P14730_001 | Banana | plasma membrane | 36.86 | 39.85 |
| HORVU7Hr1G038270.3 | Barley | endoplasmic reticulum, golgi, vacuole | 45.73 | 36.61 |
| GSMUA_Achr1P04130_001 | Banana | plasma membrane | 37.2 | 30.36 |
| GSMUA_Achr10P... | Banana | cytosol, extracellular, plastid | 25.26 | 29.37 |
| GSMUA_Achr4P10230_001 | Banana | plastid | 27.65 | 25.8 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.1 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | EnsemblPlantsGene:GSMUA_Achr10G29740_001 | EnsemblPlants:GSMUA_Achr10P29740_001 | EnsemblPlants:GSMUA_Achr10T29740_001 | InterPro:IPR023271 | UniProt:M0RMJ8 |
| InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 |
| PANTHER:PTHR19139:SF142 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | UniParc:UPI000294FDFD | : |
Description
Aquaporin NIP2-1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G29740_001]
Coordinates
chr10:+:32140024..32143007
Molecular Weight (calculated)
30737.4 Da
IEP (calculated)
7.986
GRAVY (calculated)
0.495
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSTRPNSS NEIHDIDVVT AQNSYISPTL LHQKSLKEVF PPFLARKVVA ETIATFLLVF ATCGSAALSK SNPGLVSQLG ASVAGGLIVT VMIYAVGHIS
101: GAHMNPAVTL AFAVARHFPW IQVPFYMAAQ ISGAMIASFV LRELLHPITD LGTTAPSDTA VKALVMEIVV TFCMMFVTSA VATDTKAVGE LAGLAVGSSV
201: CITSILAGPI SGGSMNPART LGPAVASSNY DSLWVYFLGP VLGTLSGACS YSFIRMTETQ PQATAAQKLS SFKLRRLQSL EMASPTNNAF DNI
101: GAHMNPAVTL AFAVARHFPW IQVPFYMAAQ ISGAMIASFV LRELLHPITD LGTTAPSDTA VKALVMEIVV TFCMMFVTSA VATDTKAVGE LAGLAVGSSV
201: CITSILAGPI SGGSMNPART LGPAVASSNY DSLWVYFLGP VLGTLSGACS YSFIRMTETQ PQATAAQKLS SFKLRRLQSL EMASPTNNAF DNI
001: MSSHSDEIEE EQISRIEKGK GKDCQGGIET VICTSPSIVC LTQKLIAEMI GTYFIVFSGC GVVVVNVLYG GTITFPGICV TWGLIVMVMI YSTGHISGAH
101: FNPAVTVTFA IFRRFPWHQV PLYIGAQFAG SLLASLTLRL MFKVTPEAFF GTTPADSPAR ALVAEIIISF LLMFVISGVA TDNRAVGELA GIAVGMTIMV
201: NVFVAGPISG ASMNPARSLG PALVMGVYKH IWVYIVGPVL GVISGGFVYN LIRFTDKPLR ELTKSASFLR AVSPSHKGSS SKT
101: FNPAVTVTFA IFRRFPWHQV PLYIGAQFAG SLLASLTLRL MFKVTPEAFF GTTPADSPAR ALVAEIIISF LLMFVISGVA TDNRAVGELA GIAVGMTIMV
201: NVFVAGPISG ASMNPARSLG PALVMGVYKH IWVYIVGPVL GVISGGFVYN LIRFTDKPLR ELTKSASFLR AVSPSHKGSS SKT
Arabidopsis Description
NIP4-1Putative aquaporin NIP4-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIZ9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.