CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037228_P001	Maize	cytosol, plasma membrane, plastid	97.29	97.62
Zm00001d044826_P001	Maize	cytosol, endoplasmic reticulum, plastid	96.27	94.35
Os06t0228200-01	Rice	plasma membrane	90.85	89.93
TraesCS7A01G187800.1	Wheat	endoplasmic reticulum, golgi, peroxisome	86.1	84.67
HORVU7Hr1G038220.1	Barley	endoplasmic reticulum, golgi, peroxisome	85.76	84.33
TraesCS7D01G188800.2	Wheat	plasma membrane	85.76	84.33
TraesCS7B01G092900.1	Wheat	endoplasmic reticulum, golgi, peroxisome	85.42	84.0
EES07262	Sorghum	cytosol, peroxisome, plasma membrane	78.98	78.45
GSMUA_Achr10P...	Banana	endoplasmic reticulum, peroxisome, plasma membrane	63.05	63.48
GSMUA_Achr5P23340_001	Banana	peroxisome	62.37	62.8
GSMUA_Achr9P27460_001	Banana	cytosol, peroxisome, plasma membrane	58.64	57.48
PGSC0003DMT400035640	Potato	endoplasmic reticulum, extracellular	34.24	56.74
VIT_14s0108g00700.t01	Wine grape	peroxisome	55.93	56.12
GSMUA_Achr6P02660_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	61.02	55.73
Solyc03g013340.2.1	Tomato	cytosol	53.22	55.48
HORVU7Hr1G038270.3	Barley	endoplasmic reticulum, golgi, vacuole	62.37	50.27
PGSC0003DMT400035638	Potato	cytosol, golgi, plasma membrane	21.36	47.73
KRH40096	Soybean	plastid	44.75	45.05
KRH01175	Soybean	plastid	44.75	44.75
EES06549	Sorghum	cytoskeleton, cytosol, peroxisome	38.64	39.72
OQU77604	Sorghum	plasma membrane	37.97	39.58
EER91378	Sorghum	plastid	40.0	39.2
KXG31601	Sorghum	golgi, plasma membrane, plastid	34.92	36.52
KXG20157	Sorghum	golgi, nucleus, plasma membrane	34.24	34.71
EES14542	Sorghum	golgi, peroxisome, vacuole	29.49	30.1
OQU79872	Sorghum	cytosol, peroxisome, vacuole	29.49	29.29
KXG24412	Sorghum	vacuole	28.47	27.27
EES00431	Sorghum	plasma membrane	25.42	25.95

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	EntrezGene:8081289	UniProt:A9XHW6	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
EnsemblPlants:EER89472	ProteinID:EER89472	ProteinID:EER89472.1	EMBL:EF408053	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833
GO:GO:0008150	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220
GO:GO:0055085	InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783
ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF142	EnsemblPlantsGene:SORBI_3010G092600	SUPFAM:SSF81338	unigene:Sbi.18128
TMHMM:TMhelix	UniParc:UPI000162D476	RefSeq:XP_002438105.1	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:8195416..8200323

Molecular Weight (calculated)

31360.9 Da

IEP (calculated)

7.926

GRAVY (calculated)

0.485

Length

295 amino acids

Sequence
(BLAST)

001: MAASTASRTN SRVNYSNEIH DLSTVQSGSA VPTLFYPDKS IADIFPPHLG KKVISEVVAT FLLVFVTCGA ASIYGEDNKR ISQLGQSVAG GLIVTVMIYA
101: TGHISGAHMN PAVTLSFACF RHFPWIQVPF YWAAQFTGAM CAAFVLKAVL HPIAVIGTTT PSGPHWHALV IEIVVTFNMM FVTCAVATDS RAVGELAGLA
201: VGSAVCITSI FAGPVSGGSM NPARTLAPAV ASNVFTGLWI YFLGPVIGTL SGAWVYTYIR FEEAPAAKDT QRLSSFKLRR LQSQSALAAD EFDTV

Best Arabidopsis Sequence Match ( AT4G10380.1 )
(BLAST)

001: MAPPEAEVGA VMVMAPPTPG TPGTPGGPLI TGMRVDSMSF DHRKPTPRCK CLPVMGSTWG QHDTCFTDFP SPDVSLTRKL GAEFVGTFIL IFTATAGPIV
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR

Arabidopsis Description

NIP5-1At4g10380 [Source:UniProtKB/TrEMBL;Acc:A3KPG0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.