CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

nucleus 1
vacuole 2
plastid 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, plasma membrane, plastid, vacuole
BaCelLo:	nucleus
MultiLoc:	vacuole
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024634_P001	Maize	cytosol, peroxisome, vacuole	67.86	74.91
Os08t0151900-00	Rice	endoplasmic reticulum, plasma membrane	39.94	57.21
OQU79872	Sorghum	cytosol, peroxisome, vacuole	42.86	44.44
EES14542	Sorghum	golgi, peroxisome, vacuole	40.58	43.25
EER91378	Sorghum	plastid	30.84	31.56
OQU77604	Sorghum	plasma membrane	26.95	29.33
EES06549	Sorghum	cytoskeleton, cytosol, peroxisome	26.95	28.92
EER89472	Sorghum	cytosol, plasma membrane, plastid	27.27	28.47
EES07262	Sorghum	cytosol, peroxisome, plasma membrane	26.95	27.95
KXG20157	Sorghum	golgi, nucleus, plasma membrane	25.97	27.49
KXG31601	Sorghum	golgi, plasma membrane, plastid	25.0	27.3
EES00431	Sorghum	plasma membrane	21.1	22.49

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	UniProt:A0A1B6PFE7	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	EnsemblPlants:KXG24412	ProteinID:KXG24412	ProteinID:KXG24412.1
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF159	EnsemblPlantsGene:SORBI_3007G038500	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI00081AE922	SEG:seg

Description

hypothetical protein

Coordinates

chr7:-:3735702..3736780

Molecular Weight (calculated)

31749.6 Da

IEP (calculated)

9.102

GRAVY (calculated)

0.380

Length

308 amino acids

Sequence
(BLAST)

001: MADQTTVSVE EQRQVAISVL CSTPSERSLA VAVAAGGSAS TPRSNTSKQL VPLDSLQKLM LKSPPQADVV EDDEQTQLVP LAKKVAAEFI GTFILMFAVV
101: STIVADAQHG GGAEGLVGVA ASAGLAVVAV VLAVVHVSGS HLNPAVSLAM AVFGHLPRAH VLPYAAAQTM GSLAATFLAK AMYRPADPAV MATVPRAGVG
201: AAQAFFLELV LTFVLVFVIT AVATDPTSAK QRAGGHRDRG GDNDERSHRR VTSVHAVLCR PSTGPSMNPA RTIAAALATG KYKDIWVYLL APPLGAIAGA
301: ATYTLIKP

Best Arabidopsis Sequence Match ( AT1G80760.1 )
(BLAST)

001: MDHEEIPSTP STPATTPGTP GAPLFGGFEG KRNGHNGRYT PKSLLKSCKC FSVDNEWALE DGRLPPVTCS LPPPNVSLYR KLGAEFVGTL ILIFAGTATA
101: IVNQKTDGAE TLIGCAASAG LAVMIVILST GHISGAHLNP AVTIAFAALK HFPWKHVPVY IGAQVMASVS AAFALKAVFE PTMSGGVTVP TVGLSQAFAL
201: EFIISFNLMF VVTAVATDTR AVGELAGIAV GATVMLNILI AGPATSASMN PVRTLGPAIA ANNYRAIWVY LTAPILGALI GAGTYTIVKL PEEDEAPKER
301: RSFRR

Arabidopsis Description

NIP6-1Aquaporin NIP6-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAI4]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.