Factsheet for Zm00001d024634_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, vacuole
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24412	Sorghum	vacuole	74.91	67.86
Os08t0151900-00	Rice	endoplasmic reticulum, plasma membrane	40.14	52.09
Zm00001d049578_P001	Maize	golgi, plasma membrane, vacuole	45.16	42.57
Zm00001d016237_P001	Maize	cytosol, peroxisome, plasma membrane	34.05	33.69
Zm00001d037733_P001	Maize	plasma membrane	32.97	32.39
Zm00001d032461_P001	Maize	plastid	34.77	32.12
Zm00001d018037_P001	Maize	cytosol, peroxisome, plasma membrane	31.9	30.17
Zm00001d052261_P001	Maize	cytosol, plasma membrane, plastid	22.58	29.86
Zm00001d037228_P001	Maize	cytosol, plasma membrane, plastid	30.47	28.91
Zm00001d044826_P001	Maize	cytosol, endoplasmic reticulum, plastid	30.47	28.24
Zm00001d046303_P001	Maize	golgi, peroxisome, plasma membrane	28.67	25.24
Zm00001d040108_P001	Maize	plasma membrane	26.52	24.75

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	UniProt:A0A1D6J0S8	ProteinID:AQK41668.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS
PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF159	SUPFAM:SSF81338
TMHMM:TMhelix	UniParc:UPI000844D26C	EnsemblPlantsGene:Zm00001d024634	EnsemblPlants:Zm00001d024634_P001	EnsemblPlants:Zm00001d024634_T001	SEG:seg

Description

Probable aquaporin NIP5-1

Coordinates

chr10:+:81353456..81354480

Molecular Weight (calculated)

28277.7 Da

IEP (calculated)

7.072

GRAVY (calculated)

0.644

Length

279 amino acids

Sequence
(BLAST)

001: MAEHATTGVE EQRQVAISMC SAPTPSKLVA VESSSLQKLM LKSPPQADAH GDEQQGREVP LAKKVAAEFV GTFILMFAVV STVVADAQHG GAEGLVGVAA
101: AAGLAVVAVV LAVVSVSGSH LNPAVSLAMG VFGYLPRAHV LPYAAAQTAG SAAAAFLAKA MYRPADPAVM ATVPRVGAAQ AFFLELVLTF VLMFVIAAVA
201: TDPTSATLEN SKELVAIAIA AAIMMNALIG GPSTGPSMNP ARTIGAALAT GKYKDIWVYL LAPPLGAIAG AATYTLIKP

Best Arabidopsis Sequence Match ( AT1G80760.1 )
(BLAST)

001: MDHEEIPSTP STPATTPGTP GAPLFGGFEG KRNGHNGRYT PKSLLKSCKC FSVDNEWALE DGRLPPVTCS LPPPNVSLYR KLGAEFVGTL ILIFAGTATA
101: IVNQKTDGAE TLIGCAASAG LAVMIVILST GHISGAHLNP AVTIAFAALK HFPWKHVPVY IGAQVMASVS AAFALKAVFE PTMSGGVTVP TVGLSQAFAL
201: EFIISFNLMF VVTAVATDTR AVGELAGIAV GATVMLNILI AGPATSASMN PVRTLGPAIA ANNYRAIWVY LTAPILGALI GAGTYTIVKL PEEDEAPKER
301: RSFRR

Arabidopsis Description

NIP6-1Aquaporin NIP6-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAI4]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.