Factsheet for Zm00001d052261_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, plastid

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G017130.2	Barley	endoplasmic reticulum, golgi, peroxisome	49.29	69.33
Zm00001d018037_P001	Maize	cytosol, peroxisome, plasma membrane	94.31	67.46
EES07262	Sorghum	cytosol, peroxisome, plasma membrane	94.31	67.0
TraesCS6D01G286400.1	Wheat	golgi, peroxisome, plasma membrane	85.31	61.02
TraesCS6B01G335900.1	Wheat	golgi, peroxisome, plasma membrane	85.31	61.02
TraesCS6A01G307300.1	Wheat	endoplasmic reticulum, golgi, peroxisome	85.31	61.02
Os02t0745100-01	Rice	plasma membrane, vacuole	84.36	59.73
Zm00001d037228_P001	Maize	cytosol, plasma membrane, plastid	80.09	57.48
HORVU6Hr1G075850.4	Barley	nucleus, plasma membrane, vacuole	84.83	56.29
Zm00001d044826_P001	Maize	cytosol, endoplasmic reticulum, plastid	79.62	55.81
PGSC0003DMT400035638	Potato	cytosol, golgi, plasma membrane	30.33	48.48
GSMUA_Achr10P...	Banana	endoplasmic reticulum, peroxisome, plasma membrane	63.03	45.39
GSMUA_Achr5P23340_001	Banana	peroxisome	62.09	44.71
GSMUA_Achr9P27460_001	Banana	cytosol, peroxisome, plasma membrane	63.03	44.19
VIT_14s0108g00700.t01	Wine grape	peroxisome	59.24	42.52
GSMUA_Achr6P02660_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	63.98	41.8
Solyc03g013340.2.1	Tomato	cytosol	54.98	40.99
KRH01175	Soybean	plastid	48.34	34.58
KRH40096	Soybean	plastid	47.87	34.47
PGSC0003DMT400035640	Potato	endoplasmic reticulum, extracellular	27.96	33.15
Zm00001d016237_P001	Maize	cytosol, peroxisome, plasma membrane	38.86	29.08
Zm00001d037733_P001	Maize	plasma membrane	38.39	28.52
Zm00001d032461_P001	Maize	plastid	39.81	27.81
Zm00001d049578_P001	Maize	golgi, plasma membrane, vacuole	35.55	25.34
Zm00001d024634_P001	Maize	cytosol, peroxisome, vacuole	29.86	22.58
Zm00001d046303_P001	Maize	golgi, peroxisome, plasma membrane	32.7	21.77
Zm00001d040108_P001	Maize	plasma membrane	22.27	15.72

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	ProteinID:AQK56570.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	UniProt:K7TLJ8	InterPro:MIP	InterPro:MIP_CS
PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF142	SUPFAM:SSF81338
TMHMM:TMhelix	UniParc:UPI000221FFDA	EnsemblPlantsGene:Zm00001d052261	EnsemblPlants:Zm00001d052261_P001	EnsemblPlants:Zm00001d052261_T001	SEG:seg

Description

Aquaporin NIP1-2

Coordinates

chr4:-:185174497..185177596

Molecular Weight (calculated)

22407.3 Da

IEP (calculated)

7.696

GRAVY (calculated)

0.611

Length

211 amino acids

Sequence
(BLAST)

001: MSTNSRANSR ANFNNEIHDI GTAVHNSSSL PPAYYDRSLA DMFPPHLLKK VVSEVVSTFL LVFVTCGAAG IYGSDKDRIS QLGQSVAGGL IVTVMIYAVG
101: HISGAHMNPA VTLAFAVFRH FPWIQVPFYW AAQFTGAICA SFVLKAVLHP IAVLGTTTPA GPHWHSLIIE VIVTFNMMFV TLAVATDTRA VGELAGLAVG
201: SAVCITSIFA G

Best Arabidopsis Sequence Match ( AT4G10380.1 )
(BLAST)

001: MAPPEAEVGA VMVMAPPTPG TPGTPGGPLI TGMRVDSMSF DHRKPTPRCK CLPVMGSTWG QHDTCFTDFP SPDVSLTRKL GAEFVGTFIL IFTATAGPIV
101: NQKYDGAETL IGNAACAGLA VMIIILSTGH ISGAHLNPSL TIAFAALRHF PWAHVPAYIA AQVSASICAS FALKGVFHPF MSGGVTIPSV SLGQAFALEF
201: IITFILLFVV TAVATDTRAV GELAGIAVGA TVMLNILVAG PSTGGSMNPV RTLGPAVASG NYRSLWVYLV APTLGAISGA AVYTGVKLND SVTDPPRPVR
301: SFRR

Arabidopsis Description

NIP5-1At4g10380 [Source:UniProtKB/TrEMBL;Acc:A3KPG0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.