Factsheet for Bra035520.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plastid 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41749	Canola	plasma membrane	87.93	95.95
CDX84114	Canola	plasma membrane	99.07	95.81
AT1G31885.1	Thale cress	vacuole	85.45	85.45
Bra033867.1-P	Field mustard	vacuole	80.5	77.15
Bra025436.1-P	Field mustard	plastid	32.2	52.79
Bra025435.1-P	Field mustard	plastid	26.01	51.22
Bra012567.1-P	Field mustard	cytosol, peroxisome, plasma membrane	44.58	48.32
Bra013361.1-P	Field mustard	cytosol, peroxisome, plasma membrane	44.27	48.15
Bra005428.1-P	Field mustard	extracellular, plasma membrane, plastid, vacuole	41.49	46.85
Bra028151.1-P	Field mustard	plasma membrane	40.87	46.64
Bra025437.1-P	Field mustard	plasma membrane	39.63	46.38
Bra005430.1-P	Field mustard	cytosol, plasma membrane, plastid, vacuole	40.56	45.64
TraesCS7B01G272700.1	Wheat	plasma membrane	39.01	45.16
TraesCS7D01G367800.1	Wheat	golgi, peroxisome, plasma membrane	39.01	45.16
TraesCS7A01G355000.1	Wheat	peroxisome	37.77	43.73
KXG20157	Sorghum	golgi, nucleus, plasma membrane	38.7	42.96
Solyc06g073590.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	45.2	42.32
PGSC0003DMT400015246	Potato	endoplasmic reticulum, peroxisome, plasma membrane	44.58	41.5
Os06t0552700-01	Rice	cytosol, peroxisome, plastid	34.98	41.39
Bra033181.1-P	Field mustard	plasma membrane	37.77	40.53
Bra000710.1-P	Field mustard	plasma membrane	37.46	40.2
Bra035156.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.46	39.67
Bra008442.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.46	39.67
Solyc02g071910.1.1	Tomato	endoplasmic reticulum, extracellular	27.24	38.1
Zm00001d046303_P001	Maize	golgi, peroxisome, plasma membrane	36.53	37.22
PGSC0003DMT400073240	Potato	cytosol, plasma membrane, vacuole	20.12	35.91
Bra020777.1-P	Field mustard	plasma membrane	29.1	34.56

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra035520	EnsemblPlants:Bra035520.1
EnsemblPlants:Bra035520.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	UniProt:M4F370
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF155	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI0002546379	SEG:seg

Description

AT1G31885 (E=5e-154) | transporter

Coordinates

chrA08:-:8097007..8098955

Molecular Weight (calculated)

34556.7 Da

IEP (calculated)

6.733

GRAVY (calculated)

0.318

Length

323 amino acids

Sequence
(BLAST)

001: MAEISDTTPQ TQTVTFDIED GGSGGDSRSP GISLPLVSVS FVQKLIGEFV GTFSLIFAGC AAIVVNDTYG KAVTLPGIAL VWGLTVMVMI YSIGHVSGAH
101: FNPAVSIAFA SSRKFPFKQV PGYIAAQLLG STLAAEALRL VFHLDDNVCS LKGDIYVGTY PSSSNTATFV MEFITTFNLM FVISAVATDK RANGSFAGIA
201: IGATVVLDIL FCGPISGASM NPARSLGPAL IWGCYKDLWL YIVSPVIGAL TGAWTYDMLR STKKSYGEII RPNCNKISSR DRQEASQDEI CVLQVVNQAN
301: RKEFICSSPT DINDKRNVTC KLP

Best Arabidopsis Sequence Match ( AT1G31885.1 )
(BLAST)

001: MAEISDITTQ TQTVVLDIEN YQSIDDSRSS DLSAPLVSVS FVQKLIGEFV GTFTMIFAGC SAIVVNETYG KPVTLPGIAL VWGLVVTVMI YSIGHVSGAH
101: FNPAVSIAFA SSKKFPFNQV PGYIAAQLLG STLAAAVLRL VFHLDDDVCS LKGDVYVGTY PSNSNTTSFV MEFIATFNLM FVISAVATDK RATGSFAGIA
201: IGATIVLDIL FSGPISGASM NPARSLGPAL IWGCYKDLWL YIVSPVIGAL SGAWTYGLLR STKKSYSEII RPNCNKVSSR DRQEASQDEI CVLRVVDPAN
301: QNYFICSSPT DINGKCNVTC KLA

Arabidopsis Description

NIP3-1Aquaporin NIP3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6T0]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.