CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 4
cytosol 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008442.1-P	Field mustard	cytosol, peroxisome, plasma membrane	77.63	77.38
CDY53224	Canola	cytosol, peroxisome, plasma membrane	77.63	77.38
AT1G80760.1	Thale cress	golgi, peroxisome, plasma membrane	77.3	77.05
CDY66949	Canola	cytosol, peroxisome, plasma membrane	76.97	76.72
Solyc03g117050.2.1	Tomato	plasma membrane	76.32	75.82
PGSC0003DMT400036625	Potato	plasma membrane	76.32	75.82
CDX87340	Canola	cytosol, peroxisome, plasma membrane	75.99	75.74
CDY39946	Canola	cytosol, peroxisome, plasma membrane	75.99	75.74
Bra035156.1-P	Field mustard	cytosol, peroxisome, plasma membrane	75.66	75.41
KRH44534	Soybean	plastid	75.66	75.16
KRH15764	Soybean	endoplasmic reticulum, extracellular, plastid, vacuole	25.66	75.0
KRH47366	Soybean	cytosol, plasma membrane, vacuole	44.41	62.21
KRH35064	Soybean	plastid	61.18	62.21
KRH47369	Soybean	mitochondrion, plastid	36.51	60.33
KRH47396	Soybean	plasma membrane	36.18	60.11
VIT_09s0070g00080.t01	Wine grape	plastid	69.74	59.89
KRG91709	Soybean	plastid	50.0	59.61
KRH73019	Soybean	cytosol, peroxisome, plasma membrane	37.17	43.3
KRH15118	Soybean	plasma membrane	36.84	42.91
KRH59036	Soybean	plasma membrane	36.84	41.48
KRH59035	Soybean	plasma membrane	36.51	40.96
KRH11076	Soybean	cytosol	36.18	40.29
KRH42923	Soybean	extracellular	35.86	40.22
KRH50367	Soybean	plasma membrane	34.54	40.08
KRH21197	Soybean	cytosol, peroxisome, plasma membrane	35.86	39.93
KRH42926	Soybean	plasma membrane	35.53	39.42
KRH16737	Soybean	cytosol, peroxisome, vacuole	31.25	35.19
KRH32130	Soybean	plasma membrane	31.58	34.78
KRH40096	Soybean	plastid	32.89	34.13
KRH45251	Soybean	extracellular	10.2	34.07
KRH01175	Soybean	plastid	32.57	33.56
KRH71310	Soybean	plasma membrane	32.24	33.11
KRH18910	Soybean	plasma membrane	25.99	31.47

Protein Annotations

Gene3D:1.20.1080.10	EntrezGene:100815637	MapMan:24.3.1.1	EMBL:ACUP02009105	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
EnsemblPlantsGene:GLYMA_15G003900	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0015250	GO:GO:0015267
GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	UniProt:I1MCB4	InterPro:IPR023271
EnsemblPlants:KRH09661	ProteinID:KRH09661	ProteinID:KRH09661.1	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230
PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF170	SUPFAM:SSF81338	TMHMM:TMhelix
UniParc:UPI000233ABD6	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:356131..360422

Molecular Weight (calculated)

31281.1 Da

IEP (calculated)

8.211

GRAVY (calculated)

0.432

Length

304 amino acids

Sequence
(BLAST)

001: MDNNEEIPST PATPGTPGAP LFGGFSNGRN NNSKKSLLKS CRCFSVEEWS LEDGGLPAVS CSLPLPSPPP VVPLARKIGA EFIGTFILMF AGTAAAIVNQ
101: KTNGSETLIG CAATTGLAVM IVILATGHIS GAHLNPAVTI SFAALKHFPW KHVPMYIGAQ VLASICAGFA LKGVYHPFMS GGVTVPSGGY GQSFALEFII
201: GFNLMFVVTA VATDTRAVGE LAGIAVGATV MLNILIAGPV SGGSMNPVRT LGPAVAANNY KAIWVYLVAP ILGALAGAGT YTAVKLPEED DDAKAKTSIS
301: SFRR

Best Arabidopsis Sequence Match ( AT1G80760.1 )
(BLAST)

001: MDHEEIPSTP STPATTPGTP GAPLFGGFEG KRNGHNGRYT PKSLLKSCKC FSVDNEWALE DGRLPPVTCS LPPPNVSLYR KLGAEFVGTL ILIFAGTATA
101: IVNQKTDGAE TLIGCAASAG LAVMIVILST GHISGAHLNP AVTIAFAALK HFPWKHVPVY IGAQVMASVS AAFALKAVFE PTMSGGVTVP TVGLSQAFAL
201: EFIISFNLMF VVTAVATDTR AVGELAGIAV GATVMLNILI AGPATSASMN PVRTLGPAIA ANNYRAIWVY LTAPILGALI GAGTYTIVKL PEEDEAPKER
301: RSFRR

Arabidopsis Description

NIP6-1Aquaporin NIP6-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAI4]
SUBAcon: [golgi,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.