Factsheet for TraesCS7D01G539500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane
Any Predictor:	cytosol, golgi, plasma membrane
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G553000.1	Wheat	cytosol, golgi, plasma membrane	98.28	98.62
TraesCS7B01G476700.1	Wheat	cytosol, golgi, plasma membrane	96.22	96.22
HORVU7Hr1G121250.3	Barley	cytosol, golgi, plasma membrane	95.53	95.21
TraesCS5D01G347600.1	Wheat	cytosol, golgi, plasma membrane	89.35	90.28
Zm00001d037733_P001	Maize	plasma membrane	78.01	79.93
OQU77604	Sorghum	plasma membrane	76.63	78.8
Os05t0205050-00	Rice	cytosol, peroxisome, plastid	56.36	75.93
TraesCS7D01G217400.1	Wheat	plasma membrane	67.7	70.86
Os05t0205000-01	Rice	cytosol	20.96	69.32
TraesCS3D01G139400.1	Wheat	plasma membrane	48.45	56.85
TraesCS7D01G367800.1	Wheat	golgi, peroxisome, plasma membrane	51.2	53.41
TraesCS3D01G330000.1	Wheat	plasma membrane	35.4	41.87
TraesCS1D01G176000.1	Wheat	plastid	41.92	40.8
GSMUA_Achr10P...	Banana	cytosol, extracellular, plastid	34.71	40.08
TraesCS4D01G349700.1	Wheat	plasma membrane	35.05	39.38
TraesCS7D01G299300.1	Wheat	plasma membrane	31.62	39.15
TraesCS6D01G286400.1	Wheat	golgi, peroxisome, plasma membrane	38.83	38.31
TraesCS7D01G188800.2	Wheat	plasma membrane	38.49	37.33
TraesCS6D01G072000.1	Wheat	plasma membrane	32.65	33.33
TraesCS3D01G002300.1	Wheat	plasma membrane	29.21	29.51

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0055085
InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221
PANTHER:PTHR19139	PANTHER:PTHR19139:SF189	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7D01G539500
EnsemblPlants:TraesCS7D01G539500.1	TIGR:cd00333	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7D:+:629823640..629826703

Molecular Weight (calculated)

30523.9 Da

IEP (calculated)

7.960

GRAVY (calculated)

0.415

Length

291 amino acids

Sequence
(BLAST)

001: MAGGEHGAGA NGLQDQDLTG ALEEGRGGVN QNQAGCENPE QALSSTSNNQ PMLSVQFVQK ILAEIFGTYF LIFAGCAAVA VNKRTAGTVT FPGICITWGL
101: AVMVMVYSVG HISGAHFNPA VTFAFATCGR FPWRQVPAYA AAQVLGSTAA SITLRLLFGG EPEHFFGTVP SGSDVQSLVL EFIITFYLMF VVSGVATDNR
201: AIGELAGLAV GATVLLNVLF AGPISGASMN PARTIGPAMV LGRYTGIWVY IIGPVSGAVS GAWAYNLIRF TNKPLREITR TGSFLRSARM S

Best Arabidopsis Sequence Match ( AT4G18910.1 )
(BLAST)

001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR

Arabidopsis Description

NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.