Factsheet for Bra009898.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002403.1-P
Bra006619.1-P
Bra020182.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G26667.1	Bra002403.1-P	AT5G22290.1	21798944
AT5G26667.1	Bra006619.1-P	AT5G22290.1	21798944
AT5G26667.1	Bra020182.1-P	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61106	Canola	cytosol	94.37	93.56
Bra020536.1-P	Field mustard	cytosol	86.58	93.46
Bra036580.1-P	Field mustard	cytosol	84.42	93.3
AT5G26667.1	Thale cress	cytosol	82.25	91.35
CDX80561	Canola	cytosol	93.94	88.57
VIT_15s0045g01310.t01	Wine grape	cytosol	70.56	77.62
Os07t0624700-01	Rice	cytosol, extracellular	70.13	77.14
GSMUA_Achr4P12240_001	Banana	cytosol	67.97	76.59
GSMUA_Achr4P11630_001	Banana	cytosol	68.4	75.96
Os02t0778400-01	Rice	cytosol	70.13	75.7
EES14324	Sorghum	cytosol	68.83	75.0
TraesCS2B01G187300.1	Wheat	cytosol	68.4	74.18
TraesCS2D01G168400.1	Wheat	cytosol	68.4	74.18
EES05888	Sorghum	cytosol	68.4	74.18
KRH66383	Soybean	cytosol, endoplasmic reticulum	75.76	74.15
TraesCS2A01G161300.1	Wheat	cytosol	66.23	73.91
KRH48911	Soybean	nucleus	75.32	73.73
GSMUA_Achr3P27510_001	Banana	cytosol	66.67	72.64
HORVU2Hr1G029350.10	Barley	endoplasmic reticulum	67.1	69.2
Zm00001d018277_P002	Maize	cytosol	66.67	67.84
TraesCS7B01G069300.1	Wheat	cytosol	62.34	67.29
TraesCS7A01G163500.1	Wheat	cytosol	61.9	66.82
Zm00001d052108_P003	Maize	cytosol	67.1	66.81
TraesCS7D01G165600.1	Wheat	cytosol	61.04	64.68
Bra007512.1-P	Field mustard	cytosol	56.28	62.5
PGSC0003DMT400062219	Potato	cytosol	54.11	57.87
Solyc08g077300.2.1	Tomato	cytosol, plastid	53.68	57.41
Os06t0203500-01	Rice	mitochondrion	35.5	55.78
KXG19119	Sorghum	cytosol	56.71	55.04
GSMUA_Achr10P...	Banana	cytosol	58.87	54.62
TraesCS3D01G138500.1	Wheat	cytosol	54.55	52.5
TraesCS3A01G137600.1	Wheat	cytosol	53.25	51.25
TraesCS3B01G155300.1	Wheat	cytosol	52.38	50.42
Os06t0109600-01	Rice	cytosol, plasma membrane	52.38	49.79
Zm00001d035916_P001	Maize	cytosol	47.62	49.55
Bra013883.1-P	Field mustard	mitochondrion	49.78	43.4
HORVU3Hr1G026180.16	Barley	mitochondrion	51.95	40.13
HORVU7Hr1G034340.5	Barley	cytosol, nucleus, plastid	62.34	36.73
Bra038628.1-P	Field mustard	cytosol	25.54	24.58
Bra000623.1-P	Field mustard	cytosol	25.97	24.49
Bra035847.1-P	Field mustard	cytosol	24.24	23.33
Bra037526.1-P	Field mustard	plastid	25.54	22.01
Bra036193.1-P	Field mustard	plastid	23.81	21.74
Bra023111.1-P	Field mustard	mitochondrion	24.68	20.28
Bra017200.1-P	Field mustard	plastid	24.24	19.93
Bra005057.1-P	Field mustard	mitochondrion, plastid	24.24	18.67
Bra000986.1-P	Field mustard	mitochondrion	18.18	15.97
Bra038939.1-P	Field mustard	plastid	25.54	11.46

Protein Annotations

KEGG:00230+2.7.4.3	KEGG:00240+2.7.4.14	KEGG:00730+2.7.4.3	KEGG:00983+2.7.4.14	Gene3D:3.40.50.300	MapMan:6.2.3.1
InterPro:Adenylat/UMP-CMP_kin	InterPro:Adenylat_kinase_CS	EnsemblPlantsGene:Bra009898	EnsemblPlants:Bra009898.1	EnsemblPlants:Bra009898.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004127	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006207
GO:GO:0006221	GO:GO:0008150	GO:GO:0008152	GO:GO:0009041	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019205	GO:GO:0046939	GO:GO:0046940
UniProt:M4D0A0	HAMAP:MF_00235	HAMAP:MF_03172	InterPro:P-loop_NTPase	PFAM:PF00406	PRINTS:PR00094
ScanProsite:PS00113	PANTHER:PTHR23359	PANTHER:PTHR23359:SF150	SUPFAM:SSF52540	TIGRFAMs:TIGR01359	InterPro:UMP_CMP_kinase
UniParc:UPI000253F3CD	:	:	:	:	:

Description

AT5G26667 (E=6e-102) PYR6 | PYR6; cytidylate kinase/ uridylate kinase

Coordinates

chrA06:+:17966974..17968513

Molecular Weight (calculated)

25632.8 Da

IEP (calculated)

8.182

GRAVY (calculated)

-0.389

Length

231 amino acids

Sequence
(BLAST)

001: MGSTVDAANK GVNGAASAKK PTVIFVLGGP GSGKGTQCAY IVEHYGYTHL SAGDLLRAEI KSGSENGTMI QNMIKEGKIV PSEVTIKLLQ KAIQENGNDK
101: FLIDGFPRNE ENRAAFEKVT EIEPKFVLFF DCPEEEMERR LLGRNQGRED DNIETIRKRF KVFLESSLPV IQYYEAKGKV RKIHAAKPIE DVFQEVKAVF
201: SPEDEKSNAK YLGTVINYRG QVAAAMKLTI L

Best Arabidopsis Sequence Match ( AT5G26667.4 )
(BLAST)

001: MGSVDAANGS GKKPTVIFVL GGPGSGKGTQ CAYIVEHYGY THLSAGDLLR AEIKSGSENG TMIQNMIKEG KIVPSEVTIK LLQKAIQENG NDKFLIDGFP
101: RNEENRAAFE KVTEIEPKFV LFFDCPEEEM EKRLLGRNQG REDDNIETIR KRFKVFLESS LPVIHYYEAK GKVRKINAAK PIEAVFEEVK AIFSPEAEKV
201: EA

Arabidopsis Description

PYR6UMP-CMP kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UDQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.