Factsheet for TraesCS3D01G138500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G155300.1	Wheat	cytosol	96.25	96.25
TraesCS3A01G137600.1	Wheat	cytosol	95.42	95.42
KXG19119	Sorghum	cytosol	74.58	75.21
Os06t0109600-01	Rice	cytosol, plasma membrane	75.42	74.49
HORVU3Hr1G026180.16	Barley	mitochondrion	90.83	72.91
Zm00001d035916_P001	Maize	cytosol	60.42	65.32
GSMUA_Achr4P12240_001	Banana	cytosol	55.42	64.88
GSMUA_Achr4P11630_001	Banana	cytosol	55.83	64.42
GSMUA_Achr3P27510_001	Banana	cytosol	54.17	61.32
VIT_15s0045g01310.t01	Wine grape	cytosol	52.92	60.48
Bra036580.1-P	Field mustard	cytosol	51.67	59.33
CDX87049	Canola	cytosol	51.67	59.33
CDY19768	Canola	cytosol	51.67	59.33
CDY65143	Canola	cytosol	52.92	59.07
Solyc01g088480.2.1	Tomato	cytosol, plastid, unclear	51.25	58.85
AT3G60180.1	Thale cress	cytosol	50.0	58.82
AT5G26667.1	Thale cress	cytosol	50.83	58.65
Bra020536.1-P	Field mustard	cytosol	52.08	58.41
CDY05528	Canola	cytosol	52.08	58.14
PGSC0003DMT400004310	Potato	cytosol	50.0	57.42
CDY41189	Canola	cytosol	48.75	57.07
AT3G60961.1	Thale cress	cytosol	32.08	56.62
TraesCS2D01G168400.1	Wheat	cytosol	50.0	56.34
TraesCS7D01G165600.1	Wheat	cytosol	50.0	55.05
KRH48911	Soybean	nucleus	53.75	54.66
Bra009898.1-P	Field mustard	cytosol	52.5	54.55
KRH66383	Soybean	cytosol, endoplasmic reticulum	53.33	54.24
CDY61106	Canola	cytosol	52.5	54.08
PGSC0003DMT400062219	Potato	cytosol	47.92	53.24
CDX71833	Canola	cytosol	31.25	52.08
Bra007512.1-P	Field mustard	cytosol	45.0	51.92
Solyc08g077300.2.1	Tomato	cytosol, plastid	46.67	51.85
GSMUA_Achr10P...	Banana	cytosol	53.75	51.81
CDX80561	Canola	cytosol	52.5	51.43
CDX87047	Canola	cytosol	14.58	48.61
TraesCS2D01G035600.1	Wheat	mitochondrion	39.58	39.26
TraesCS5D01G118800.1	Wheat	plastid	25.0	24.9
TraesCS7D01G378900.1	Wheat	cytosol	24.58	24.48
TraesCS7D01G319000.2	Wheat	plastid	25.0	21.05
TraesCS2D01G549400.1	Wheat	mitochondrion	24.17	19.86
TraesCS4D01G321500.1	Wheat	mitochondrion	22.92	19.03
TraesCS7D01G312500.2	Wheat	mitochondrion	19.58	15.46
TraesCS6D01G077500.1	Wheat	plastid	27.92	11.32

Protein Annotations

KEGG:00230+2.7.4.3	KEGG:00240+2.7.4.14	KEGG:00730+2.7.4.3	KEGG:00983+2.7.4.14	Gene3D:3.40.50.300	MapMan:6.2.3.1
InterPro:Adenylat/UMP-CMP_kin	InterPro:Adenylat_kinase_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004127
GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0006207	GO:GO:0006221	GO:GO:0008150
GO:GO:0008152	GO:GO:0009041	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019205	HAMAP:MF_00235	HAMAP:MF_03172	InterPro:P-loop_NTPase	PFAM:PF00406	PRINTS:PR00094
ScanProsite:PS00113	PANTHER:PTHR23359	PANTHER:PTHR23359:SF103	SUPFAM:SSF52540	TIGRFAMs:TIGR01359	EnsemblPlantsGene:TraesCS3D01G138500
EnsemblPlants:TraesCS3D01G138500.1	InterPro:UMP_CMP_kinase	TIGR:cd01428	:	:	:

Description

No Description!

Coordinates

chr3D:-:96679409..96684949

Molecular Weight (calculated)

27480.0 Da

IEP (calculated)

7.117

GRAVY (calculated)

-0.472

Length

240 amino acids

Sequence
(BLAST)

001: MAEVVEVHKD WSGSFPSGKK ITVVFVIGGP GSGKGTQCAK IVSHFGFTHL SAGDLLREEV KSDTEQGTMI KNLMHEGKLV PSEIIVRLLL KAMLASGNDK
101: FLIDGFPRNE ENREAYEKII KIEPEFVLLI DCSREEMERR ILHRNQGRDD DNMETIRRRF EVFQQSTLPV IQHYEKMGKL RRVDGDRQPD MVFEDVKAVF
201: AQLNTQANQG SNVSRAQTNP FKRWFLDLFC SCFDVADRRN

Best Arabidopsis Sequence Match ( AT3G60180.2 )
(BLAST)

001: METPIDAPNK DEHECPRWKK STVVFVLGGP GSGKGTQCAN VVKHFSYTHF SAGDLLRAEI KSGSEFGAMI QSMIAEGRIV PSEITVKLLC KAMEESGNDK
101: FLIDGFPRNE ENRNVFENVA RIEPAFVLFF DCPEEELERR IMSRNQGRED DNIETIKKRF KVFVESTLPI ISYYESKGKL RKINAAKSSE EVFEAVRVLF
201: ASET

Arabidopsis Description

UMK1Probable UMP-CMP kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY84]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.