CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX70995
CDX88803
CDX92368
CDY09128
CDY35676

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G26667.1	CDX70995	AT5G22290.1	21798944
AT5G26667.1	CDX88803	AT5G22290.1	21798944
AT5G26667.1	CDX92368	AT5G22290.1	21798944
AT5G26667.1	CDY09128	AT5G22290.1	21798944
AT5G26667.1	CDY35676	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05528	Canola	cytosol	99.07	99.07
CDY19768	Canola	cytosol	92.09	94.74
CDX87049	Canola	cytosol	91.63	94.26
AT5G26667.1	Thale cress	cytosol	88.37	91.35
CDX87047	Canola	cytosol	29.77	88.89
CDY61106	Canola	cytosol	93.49	86.27
CDX80561	Canola	cytosol	93.02	81.63
GSMUA_Achr4P12240_001	Banana	cytosol	74.88	78.54
VIT_15s0045g01310.t01	Wine grape	cytosol	76.28	78.1
Os07t0624700-01	Rice	cytosol, extracellular	76.28	78.1
Os02t0778400-01	Rice	cytosol	77.67	78.04
GSMUA_Achr4P11630_001	Banana	cytosol	74.88	77.4
EES14324	Sorghum	cytosol	75.81	76.89
EES05888	Sorghum	cytosol	74.88	75.59
TraesCS2B01G187300.1	Wheat	cytosol	74.88	75.59
TraesCS2D01G168400.1	Wheat	cytosol	74.88	75.59
TraesCS2A01G161300.1	Wheat	cytosol	72.09	74.88
KRH66383	Soybean	cytosol, endoplasmic reticulum	81.4	74.15
GSMUA_Achr3P27510_001	Banana	cytosol	73.02	74.06
KRH48911	Soybean	nucleus	80.93	73.73
HORVU2Hr1G029350.10	Barley	endoplasmic reticulum	73.02	70.09
Zm00001d018277_P002	Maize	cytosol	73.49	69.6
CDY41189	Canola	cytosol	65.12	68.29
TraesCS7B01G069300.1	Wheat	cytosol	67.91	68.22
TraesCS7A01G163500.1	Wheat	cytosol	67.44	67.76
Zm00001d052108_P003	Maize	cytosol	73.02	67.67
TraesCS7D01G165600.1	Wheat	cytosol	66.51	65.6
CDX71833	Canola	cytosol	41.86	62.5
PGSC0003DMT400062219	Potato	cytosol	58.14	57.87
Solyc08g077300.2.1	Tomato	cytosol, plastid	57.67	57.41
Os06t0203500-01	Rice	mitochondrion	38.6	56.46
KXG19119	Sorghum	cytosol	61.4	55.46
GSMUA_Achr10P...	Banana	cytosol	63.72	55.02
TraesCS3D01G138500.1	Wheat	cytosol	59.07	52.92
TraesCS3A01G137600.1	Wheat	cytosol	57.67	51.67
TraesCS3B01G155300.1	Wheat	cytosol	56.74	50.83
Zm00001d035916_P001	Maize	cytosol	52.09	50.45
Os06t0109600-01	Rice	cytosol, plasma membrane	56.74	50.21
CDX89427	Canola	mitochondrion	53.95	45.85
CDX94461	Canola	mitochondrion	53.95	45.85
HORVU3Hr1G026180.16	Barley	mitochondrion	55.81	40.13
HORVU7Hr1G034340.5	Barley	cytosol, nucleus, plastid	67.91	37.24
CDY34035	Canola	cytosol	27.91	24.49
CDX83159	Canola	cytosol	27.91	24.49
CDY48140	Canola	cytosol	26.98	24.17
CDY41515	Canola	cytosol	26.51	23.75
CDX84406	Canola	cytosol	26.51	23.75
CDY16727	Canola	cytosol	26.51	23.75
CDY58452	Canola	plastid	30.7	23.08
CDY46767	Canola	mitochondrion	26.98	20.64
CDX79727	Canola	mitochondrion	26.05	20.36
CDY63236	Canola	plastid	24.19	20.31
CDY63499	Canola	mitochondrion	26.51	20.28
CDX86341	Canola	plastid	25.58	20.15
CDY18459	Canola	plastid	26.05	20.0
CDY55438	Canola	plastid	26.05	20.0
CDY70087	Canola	plastid	26.05	19.93
CDY19972	Canola	plastid	26.98	19.53
CDX85310	Canola	plastid	26.98	18.89
CDY44634	Canola	plastid	25.12	18.06
CDX74861	Canola	mitochondrion	25.12	17.88
CDX91924	Canola	mitochondrion	20.93	16.79
CDX74321	Canola	mitochondrion	20.47	16.54
CDY41765	Canola	plastid	28.37	10.61
CDY58453	Canola	cytosol	0.93	0.65

Protein Annotations

KEGG:00230+2.7.4.3	KEGG:00240+2.7.4.14	KEGG:00730+2.7.4.3	KEGG:00983+2.7.4.14	Gene3D:3.40.50.300	MapMan:6.2.3.1
GO:A0A078JBX4	UniProt:A0A078JBX4	InterPro:Adenylat/UMP-CMP_kin	InterPro:Adenylat_kinase_CS	EnsemblPlants:CDY65143	ProteinID:CDY65143
ProteinID:CDY65143.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004127	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006139	GO:GO:0006207	GO:GO:0006221	GO:GO:0008150	GO:GO:0008152	GO:GO:0009041
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019205
GO:GO:0046939	GO:GO:0046940	EnsemblPlantsGene:GSBRNA2T00044236001	HAMAP:MF_00235	HAMAP:MF_03172	InterPro:P-loop_NTPase
PFAM:PF00406	PRINTS:PR00094	ScanProsite:PS00113	PANTHER:PTHR23359	PANTHER:PTHR23359:SF118	MetaCyc:PWY-7176
MetaCyc:PWY-7219	SUPFAM:SSF52540	TIGRFAMs:TIGR01359	InterPro:UMP_CMP_kinase	UniPathway:UPA00588	UniParc:UPI0004EF08DE

Description

BnaC02g48410DUMP-CMP kinase [Source:UniProtKB/TrEMBL;Acc:A0A078JBX4]

Coordinates

chrLK034668:+:22563..25068

Molecular Weight (calculated)

24022.7 Da

IEP (calculated)

6.532

GRAVY (calculated)

-0.423

Length

215 amino acids

Sequence
(BLAST)

001: MGSVVDAANK EVNGTSSAKK PTVIFVLAGG PGSGKGTQCA YIVEHFGYTH LSAGDLLRAE IKSGSENGTM IQNMIKEGKI VPSEVTIKLL QKAIQENGND
101: KFLIDGFPRN EENRAAFEKV TEIEPKFVLF FDCPEEEMER RLLGRNQGRE DDNIETIRKR FKVFLESSLP VIQYYEAKGK VRKIHAAKPI DDVFQEVKAV
201: FSPEAEKVAG QWHLY

Best Arabidopsis Sequence Match ( AT5G26667.4 )
(BLAST)

001: MGSVDAANGS GKKPTVIFVL GGPGSGKGTQ CAYIVEHYGY THLSAGDLLR AEIKSGSENG TMIQNMIKEG KIVPSEVTIK LLQKAIQENG NDKFLIDGFP
101: RNEENRAAFE KVTEIEPKFV LFFDCPEEEM EKRLLGRNQG REDDNIETIR KRFKVFLESS LPVIHYYEAK GKVRKINAAK PIEAVFEEVK AIFSPEAEKV
201: EA

Arabidopsis Description

PYR6UMP-CMP kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UDQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.