CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX70995
CDX88803
CDX92368
CDY09128
CDY35676

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G26667.1	CDX70995	AT5G22290.1	21798944
AT5G26667.1	CDX88803	AT5G22290.1	21798944
AT5G26667.1	CDX92368	AT5G22290.1	21798944
AT5G26667.1	CDY09128	AT5G22290.1	21798944
AT5G26667.1	CDY35676	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61106	Canola	cytosol	93.47	98.28
CDY19768	Canola	cytosol	80.41	94.26
Bra009898.1-P	Field mustard	cytosol	88.57	93.94
CDX87049	Canola	cytosol	80.0	93.78
CDY65143	Canola	cytosol	81.63	93.02
CDY05528	Canola	cytosol	81.63	93.02
AT5G26667.1	Thale cress	cytosol	77.96	91.83
CDX87047	Canola	cytosol	26.12	88.89
VIT_15s0045g01310.t01	Wine grape	cytosol	66.94	78.1
Os07t0624700-01	Rice	cytosol, extracellular	66.53	77.62
GSMUA_Achr4P12240_001	Banana	cytosol	64.08	76.59
Os02t0778400-01	Rice	cytosol	66.53	76.17
GSMUA_Achr4P11630_001	Banana	cytosol	64.49	75.96
EES14324	Sorghum	cytosol	65.31	75.47
TraesCS2D01G168400.1	Wheat	cytosol	64.9	74.65
TraesCS2B01G187300.1	Wheat	cytosol	64.9	74.65
KRH66383	Soybean	cytosol, endoplasmic reticulum	71.84	74.58
TraesCS2A01G161300.1	Wheat	cytosol	62.86	74.4
EES05888	Sorghum	cytosol	64.49	74.18
KRH48911	Soybean	nucleus	71.43	74.15
GSMUA_Achr3P27510_001	Banana	cytosol	62.86	72.64
HORVU2Hr1G029350.10	Barley	endoplasmic reticulum	64.08	70.09
CDY41189	Canola	cytosol	57.14	68.29
Zm00001d018277_P002	Maize	cytosol	63.27	68.28
TraesCS7B01G069300.1	Wheat	cytosol	58.78	67.29
TraesCS7A01G163500.1	Wheat	cytosol	58.37	66.82
Zm00001d052108_P003	Maize	cytosol	63.27	66.81
TraesCS7D01G165600.1	Wheat	cytosol	57.55	64.68
CDX71833	Canola	cytosol	36.33	61.81
PGSC0003DMT400062219	Potato	cytosol	50.2	56.94
Solyc08g077300.2.1	Tomato	cytosol, plastid	49.8	56.48
Os06t0203500-01	Rice	mitochondrion	33.47	55.78
KXG19119	Sorghum	cytosol	53.06	54.62
GSMUA_Achr10P...	Banana	cytosol	55.51	54.62
TraesCS3D01G138500.1	Wheat	cytosol	51.43	52.5
TraesCS3A01G137600.1	Wheat	cytosol	50.61	51.67
TraesCS3B01G155300.1	Wheat	cytosol	49.39	50.42
Zm00001d035916_P001	Maize	cytosol	45.31	50.0
Os06t0109600-01	Rice	cytosol, plasma membrane	49.39	49.79
CDX94461	Canola	mitochondrion	47.35	45.85
CDX89427	Canola	mitochondrion	47.35	45.85
HORVU3Hr1G026180.16	Barley	mitochondrion	48.98	40.13
HORVU7Hr1G034340.5	Barley	cytosol, nucleus, plastid	58.78	36.73
CDX83159	Canola	cytosol	24.08	24.08
CDY34035	Canola	cytosol	24.08	24.08
CDY41515	Canola	cytosol	23.27	23.75
CDX84406	Canola	cytosol	23.27	23.75
CDY48140	Canola	cytosol	22.86	23.33
CDY16727	Canola	cytosol	22.45	22.92
CDY58452	Canola	plastid	26.53	22.73
CDY63236	Canola	plastid	21.63	20.7
CDX86341	Canola	plastid	22.86	20.51
CDX79727	Canola	mitochondrion	22.86	20.36
CDY46767	Canola	mitochondrion	23.27	20.28
CDY63499	Canola	mitochondrion	23.27	20.28
CDY18459	Canola	plastid	22.86	20.0
CDY55438	Canola	plastid	22.86	20.0
CDY70087	Canola	plastid	22.86	19.93
CDY19972	Canola	plastid	24.08	19.87
CDX85310	Canola	plastid	24.08	19.22
CDY44634	Canola	plastid	22.45	18.39
CDX74861	Canola	mitochondrion	22.45	18.21
CDX91924	Canola	mitochondrion	17.96	16.42
CDX74321	Canola	mitochondrion	17.55	16.17
CDY41765	Canola	plastid	25.71	10.96
CDY58453	Canola	cytosol	1.63	1.3

Protein Annotations

KEGG:00230+2.7.4.3	KEGG:00240+2.7.4.14	KEGG:00730+2.7.4.3	KEGG:00983+2.7.4.14	Gene3D:3.40.50.300	MapMan:6.2.3.1
GO:A0A078CTT6	InterPro:Adenylat/UMP-CMP_kin	InterPro:Adenylat_kinase_CS	EnsemblPlants:CDX80561	ProteinID:CDX80561	ProteinID:CDX80561.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004127	GO:GO:0005488	GO:GO:0005524
GO:GO:0006139	GO:GO:0006207	GO:GO:0006221	GO:GO:0008150	GO:GO:0008152	GO:GO:0009041
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019205	EnsemblPlantsGene:GSBRNA2T00133680001
HAMAP:MF_00235	HAMAP:MF_03172	InterPro:P-loop_NTPase	PFAM:PF00406	PRINTS:PR00094	ScanProsite:PS00113
PANTHER:PTHR23359	PANTHER:PTHR23359:SF150	MetaCyc:PWY-7176	MetaCyc:PWY-7219	SUPFAM:SSF52540	TIGRFAMs:TIGR01359
InterPro:UMP_CMP_kinase	UniPathway:UPA00588	UniParc:UPI0004EE9E88	:	:	:

Description

BnaC07g28830D

Coordinates

chrLK031821:+:1349728..1352438

Molecular Weight (calculated)

27307.7 Da

IEP (calculated)

8.728

GRAVY (calculated)

-0.432

Length

245 amino acids

Sequence
(BLAST)

001: MGSTVDAANK GVNGTASAKK PTVIFVLGGP GSGKGTQCAY IVEHYGYTHL SAGDLLRAEI KSGSENGTMI QNMIKEGKIV PSEVTIKLLQ KAIQENGNDK
101: FLIDGFPRNE ENRAAFEKVT EIEPKFVLFF DCPEEEMERR LLGRNQGRED DNIETIRKRF KVFLESSLPV IQYYEAKGKV RKIHAAKPIE DVFQEVKAVF
201: TPEAEKSNAK YLGIMINYRG QSSCSYEVNN YVNVLFRLKP KAAAS

Best Arabidopsis Sequence Match ( AT5G26667.4 )
(BLAST)

001: MGSVDAANGS GKKPTVIFVL GGPGSGKGTQ CAYIVEHYGY THLSAGDLLR AEIKSGSENG TMIQNMIKEG KIVPSEVTIK LLQKAIQENG NDKFLIDGFP
101: RNEENRAAFE KVTEIEPKFV LFFDCPEEEM EKRLLGRNQG REDDNIETIR KRFKVFLESS LPVIHYYEAK GKVRKINAAK PIEAVFEEVK AIFSPEAEKV
201: EA

Arabidopsis Description

PYR6UMP-CMP kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UDQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.