Factsheet for VIT_15s0045g01310.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_06s0080g00970.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G26667.1	VIT_06s0080g00970.t01	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87049	Canola	cytosol	79.05	79.43
CDY19768	Canola	cytosol	79.05	79.43
PGSC0003DMT400004310	Potato	cytosol	78.57	78.95
Bra036580.1-P	Field mustard	cytosol	78.57	78.95
Solyc01g088480.2.1	Tomato	cytosol, plastid, unclear	77.14	77.51
Bra020536.1-P	Field mustard	cytosol	78.57	77.1
AT5G26667.1	Thale cress	cytosol	76.19	76.92
CDY05528	Canola	cytosol	78.57	76.74
CDX87047	Canola	cytosol	26.19	76.39
CDY65143	Canola	cytosol	78.1	76.28
Os07t0624700-01	Rice	cytosol, extracellular	75.71	75.71
EES14324	Sorghum	cytosol	76.19	75.47
GSMUA_Achr4P12240_001	Banana	cytosol	72.86	74.63
TraesCS2A01G161300.1	Wheat	cytosol	73.33	74.4
Os02t0778400-01	Rice	cytosol	75.71	74.3
EES05888	Sorghum	cytosol	74.76	73.71
GSMUA_Achr4P11630_001	Banana	cytosol	72.86	73.56
TraesCS2B01G187300.1	Wheat	cytosol	74.29	73.24
TraesCS2D01G168400.1	Wheat	cytosol	74.29	73.24
GSMUA_Achr3P27510_001	Banana	cytosol	72.38	71.7
AT3G60180.1	Thale cress	cytosol	68.57	70.59
Bra009898.1-P	Field mustard	cytosol	77.62	70.56
KRH48911	Soybean	nucleus	79.05	70.34
CDY61106	Canola	cytosol	77.62	69.96
KRH66383	Soybean	cytosol, endoplasmic reticulum	78.57	69.92
HORVU2Hr1G029350.10	Barley	endoplasmic reticulum	73.81	69.2
AT3G60961.1	Thale cress	cytosol	44.76	69.12
TraesCS7A01G163500.1	Wheat	cytosol	70.0	68.69
CDY41189	Canola	cytosol	66.67	68.29
TraesCS7B01G069300.1	Wheat	cytosol	69.05	67.76
Zm00001d018277_P002	Maize	cytosol	72.86	67.4
CDX80561	Canola	cytosol	78.1	66.94
Zm00001d052108_P003	Maize	cytosol	73.33	66.38
TraesCS7D01G165600.1	Wheat	cytosol	68.1	65.6
Bra007512.1-P	Field mustard	cytosol	62.86	63.46
CDX71833	Canola	cytosol	41.9	61.11
Os06t0203500-01	Rice	mitochondrion	40.48	57.82
GSMUA_Achr10P...	Banana	cytosol	65.71	55.42
KXG19119	Sorghum	cytosol	62.38	55.04
VIT_15s0048g02670.t01	Wine grape	plasma membrane	57.14	53.1
TraesCS3D01G138500.1	Wheat	cytosol	60.48	52.92
TraesCS3A01G137600.1	Wheat	cytosol	60.0	52.5
Zm00001d035916_P001	Maize	cytosol	54.29	51.35
TraesCS3B01G155300.1	Wheat	cytosol	58.57	51.25
Os06t0109600-01	Rice	cytosol, plasma membrane	59.05	51.03
VIT_16s0022g00980.t01	Wine grape	mitochondrion	53.33	47.06
HORVU3Hr1G026180.16	Barley	mitochondrion	56.67	39.8
HORVU7Hr1G034340.5	Barley	cytosol, nucleus, plastid	69.52	37.24
VIT_17s0000g01730.t01	Wine grape	cytosol	25.24	21.63
VIT_01s0010g02770.t01	Wine grape	cytosol	25.24	21.63
VIT_13s0067g03360.t01	Wine grape	plastid	27.14	19.93
VIT_17s0000g01680.t01	Wine grape	mitochondrion	18.1	14.07
VIT_14s0171g00160.t01	Wine grape	mitochondrion	19.05	13.79
VIT_18s0041g01280.t01	Wine grape	mitochondrion, plastid	28.57	12.5
VIT_11s0149g00040.t01	Wine grape	plastid	30.95	10.89

Protein Annotations

KEGG:00230+2.7.4.3	KEGG:00240+2.7.4.14	KEGG:00730+2.7.4.3	KEGG:00983+2.7.4.14	EntrezGene:100241478	wikigene:100241478
Gene3D:3.40.50.300	MapMan:6.2.3.1	InterPro:Adenylat/UMP-CMP_kin	InterPro:Adenylat_kinase_CS	ProteinID:CBI38106	ProteinID:CBI38106.3
UniProt:D7U5T7	EMBL:FN596510	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004127
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006139	GO:GO:0006207	GO:GO:0006221	GO:GO:0008150	GO:GO:0008152
GO:GO:0009041	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019205	GO:GO:0046939	GO:GO:0046940	EntrezGene:LOC100241478	wikigene:LOC100241478	HAMAP:MF_00235
HAMAP:MF_03172	InterPro:P-loop_NTPase	PFAM:PF00406	PRINTS:PR00094	ScanProsite:PS00113	PANTHER:PTHR23359
PANTHER:PTHR23359:SF150	SUPFAM:SSF52540	TIGR:TC54990	TIGR:TC65990	TIGRFAMs:TIGR01359	InterPro:UMP_CMP_kinase
UniParc:UPI0001984DDC	ArrayExpress:VIT_15s0045g01310	EnsemblPlantsGene:VIT_15s0045g01310	EnsemblPlants:VIT_15s0045g01310.t01	unigene:Vvi.7492	RefSeq:XP_002263322
RefSeq:XP_002263322.1	RefSeq:XP_003633878	RefSeq:XP_003633878.1	RefSeq:XP_003633879	RefSeq:XP_003633879.1	:

Description

UMP-CMP kinase [Source:UniProtKB/TrEMBL;Acc:D7U5T7]

Coordinates

chr15:+:7079032..7090195

Molecular Weight (calculated)

23533.0 Da

IEP (calculated)

4.849

GRAVY (calculated)

-0.404

Length

210 amino acids

Sequence
(BLAST)

001: MGSAPESVIK ETNENLLAEK KVKVVFVLGG PGSGKGTQCA NIVKHFGYTH LSAGDLLRAE IKSGSENGNM IQSMIKEGKI VPSEVTIKLL QRAILEDSND
101: KFLIDGFPRN EENRAAFEAV TKIEPEFVLF FDCSEEEMER RILNRNQGRE DDNVETIRKR FKVFLESSLP VIEYYESKGK VRKIDAAQSI EEVFEAVKAV
201: FTPTNEQVDA

Best Arabidopsis Sequence Match ( AT5G26667.4 )
(BLAST)

001: MGSVDAANGS GKKPTVIFVL GGPGSGKGTQ CAYIVEHYGY THLSAGDLLR AEIKSGSENG TMIQNMIKEG KIVPSEVTIK LLQKAIQENG NDKFLIDGFP
101: RNEENRAAFE KVTEIEPKFV LFFDCPEEEM EKRLLGRNQG REDDNIETIR KRFKVFLESS LPVIHYYEAK GKVRKINAAK PIEAVFEEVK AIFSPEAEKV
201: EA

Arabidopsis Description

PYR6UMP-CMP kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UDQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.