Factsheet for VIT_15s0048g02670.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 7
golgi 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0045g01310.t01	Wine grape	cytosol	53.1	57.14
VIT_16s0022g00980.t01	Wine grape	mitochondrion	42.92	40.76
VIT_17s0000g01730.t01	Wine grape	cytosol	22.57	20.82
VIT_01s0010g02770.t01	Wine grape	cytosol	20.8	19.18
VIT_13s0067g03360.t01	Wine grape	plastid	17.26	13.64
VIT_18s0041g01280.t01	Wine grape	mitochondrion, plastid	24.78	11.67
VIT_17s0000g01680.t01	Wine grape	mitochondrion	13.72	11.48
VIT_14s0171g00160.t01	Wine grape	mitochondrion	14.6	11.38
VIT_11s0149g00040.t01	Wine grape	plastid	23.45	8.88

Protein Annotations

KEGG:00230+2.7.4.3	KEGG:00240+2.7.4.14	KEGG:00730+2.7.4.3	KEGG:00983+2.7.4.14	Gene3D:3.40.50.300	MapMan:6.2.3.1
InterPro:Adenylat/UMP-CMP_kin	ProteinID:CCB61293	ProteinID:CCB61293.1	UniProt:F6I2X6	EMBL:FN596739	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004127	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006139	GO:GO:0006207	GO:GO:0006221	GO:GO:0008150	GO:GO:0008152	GO:GO:0009041
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019205	GO:GO:0046939	GO:GO:0046940	HAMAP:MF_00235	InterPro:P-loop_NTPase
PFAM:PF00406	PRINTS:PR00094	PANTHER:PTHR23359	PANTHER:PTHR23359:SF150	SUPFAM:SSF52540	TIGRFAMs:TIGR01359
TMHMM:TMhelix	InterPro:UMP_CMP_kinase	UniParc:UPI0002109EE9	ArrayExpress:VIT_15s0048g02670	EnsemblPlantsGene:VIT_15s0048g02670	EnsemblPlants:VIT_15s0048g02670.t01
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr15:+:16807997..16809403

Molecular Weight (calculated)

25817.4 Da

IEP (calculated)

6.504

GRAVY (calculated)

-0.005

Length

226 amino acids

Sequence
(BLAST)

001: MCYQLLCLQK LSRVTLCIAI HLFSPLLFFL FLPHFVCKFH SFQLVILLIG SQCPLIVKQF RLTHLSAGDL LQAEIELGSE NGKMIQDYKK EGKIVPSEVT
101: VKLLQQAMQG STNNKFLIDG FPCNEENRTA FENIMKVEPD FVLFFDCSQE ELTRRILNRN QGRVDDNIQA IPKRFQVYFE STLPVIDYYS SKGKVQKIDA
201: ERSIEEVFEA VKSIFLNFSG GSGEGN

Best Arabidopsis Sequence Match ( AT5G26667.4 )
(BLAST)

001: MGSVDAANGS GKKPTVIFVL GGPGSGKGTQ CAYIVEHYGY THLSAGDLLR AEIKSGSENG TMIQNMIKEG KIVPSEVTIK LLQKAIQENG NDKFLIDGFP
101: RNEENRAAFE KVTEIEPKFV LFFDCPEEEM EKRLLGRNQG REDDNIETIR KRFKVFLESS LPVIHYYEAK GKVRKINAAK PIEAVFEEVK AIFSPEAEKV
201: EA

Arabidopsis Description

PYR6UMP-CMP kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UDQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.