Factsheet for VIT_16s0022g00980.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39992	Soybean	mitochondrion	63.87	65.8
KRH23793	Soybean	mitochondrion	63.87	64.41
CDX94461	Canola	mitochondrion	67.65	63.64
CDX89427	Canola	mitochondrion	66.81	62.85
AT4G25280.1	Thale cress	mitochondrion	65.97	60.62
Bra013883.1-P	Field mustard	mitochondrion	66.81	60.0
Solyc03g083610.2.1	Tomato	mitochondrion, plastid	57.14	57.38
TraesCS2B01G049600.1	Wheat	mitochondrion	56.3	55.14
TraesCS2D01G035600.1	Wheat	mitochondrion	55.88	54.96
GSMUA_Achr4P18070_001	Banana	cytosol, plastid	56.72	54.88
TraesCS2A01G036500.1	Wheat	mitochondrion	55.88	54.73
HORVU2Hr1G005480.2	Barley	mitochondrion	55.46	54.32
Zm00001d024919_P001	Maize	mitochondrion	45.8	53.43
VIT_15s0045g01310.t01	Wine grape	cytosol	47.06	53.33
EES10340	Sorghum	mitochondrion	55.88	53.2
Os04t0105500-02	Rice	mitochondrion	54.62	46.26
VIT_15s0048g02670.t01	Wine grape	plasma membrane	40.76	42.92
PGSC0003DMT400049085	Potato	mitochondrion	53.78	40.51
VIT_01s0010g02770.t01	Wine grape	cytosol	23.95	23.27
VIT_17s0000g01730.t01	Wine grape	cytosol	23.95	23.27
VIT_13s0067g03360.t01	Wine grape	plastid	23.11	19.23
VIT_14s0171g00160.t01	Wine grape	mitochondrion	16.39	13.45
VIT_17s0000g01680.t01	Wine grape	mitochondrion	15.13	13.33
VIT_18s0041g01280.t01	Wine grape	mitochondrion, plastid	24.79	12.29
VIT_11s0149g00040.t01	Wine grape	plastid	23.95	9.55

Protein Annotations

KEGG:00230+2.7.4.3	KEGG:00240+2.7.4.14	KEGG:00730+2.7.4.3	KEGG:00983+2.7.4.14	EntrezGene:100248550	wikigene:100248550
Gene3D:3.40.50.300	MapMan:6.2.3.1	InterPro:Adenylat/UMP-CMP_kin	InterPro:Adenylat_kinase_CS	ProteinID:CBI24567	ProteinID:CBI24567.3
UniProt:D7T276	EMBL:FN595506	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004127
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006139	GO:GO:0006207	GO:GO:0006221	GO:GO:0008150	GO:GO:0008152
GO:GO:0009041	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019205	GO:GO:0046939	GO:GO:0046940	EntrezGene:LOC100248550	wikigene:LOC100248550	HAMAP:MF_00235
HAMAP:MF_03172	InterPro:P-loop_NTPase	PFAM:PF00406	PRINTS:PR00094	ScanProsite:PS00113	PANTHER:PTHR23359
PANTHER:PTHR23359:SF118	SUPFAM:SSF52540	TIGRFAMs:TIGR01359	InterPro:UMP_CMP_kinase	UniParc:UPI0001985DED	ArrayExpress:VIT_16s0022g00980
EnsemblPlantsGene:VIT_16s0022g00980	EnsemblPlants:VIT_16s0022g00980.t01	unigene:Vvi.10318	RefSeq:XP_002263160	RefSeq:XP_002263160.1	RefSeq:XP_010662397.1
RefSeq:XP_010662398.1	RefSeq:XP_010662399.1	RefSeq:XP_019081794.1	RefSeq:XP_019081795.1	SEG:seg	:

Description

UMP-CMP kinase [Source:UniProtKB/TrEMBL;Acc:D7T276]

Coordinates

chr16:-:12536807..12548246

Molecular Weight (calculated)

26741.2 Da

IEP (calculated)

7.960

GRAVY (calculated)

-0.232

Length

238 amino acids

Sequence
(BLAST)

001: MWRRVTSLSP FISSSKPSIR NQASYGGKIW ELFTTEILTP AKAGISSDEK TPFITFVVGG PGSGKGTQCA KIVETFGFTH ISAGELLRRE ISCNSEHGSM
101: ILDSIREGKI VPSEVTVKLI EKEMESSKNN KFLIDGFPRT EENRIAFERV IGAEPNFVLF FHCPEEEMVK RLLSRNEGRV DDNIDTIKKR LEVFTALHLP
201: VIKYYSEKGK LYKINAVGTV DEIFEQVRPV FAVCEATK

Best Arabidopsis Sequence Match ( AT4G25280.2 )
(BLAST)

001: MWRRVALLSP MISSSSRSLK LSQAASGLKV GESFATDIIS QEERVSPPKE KAPFITFVLG GPGSGKGTQC EKIVETFGLQ HLSAGDLLRR EIAMHTENGA
101: MILNLIKDGK IVPSEVTVKL IQKELESSDN RKFLIDGFPR TEENRVAFER IIRADPDVVL FFDCPEEEMV KRVLNRNQGR IDDNITTMKK RLKIFNALNR
201: PVIDYYKNKG KLYTINAVGT VDDIFQHVLP IFNSFEQLKE SSHVNPQSHL GSSLVENSS

Arabidopsis Description

UMK2P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT4G25280]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.