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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • cytosol 2
  • mitochondrion 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX94461 Canola mitochondrion 83.4 85.38
CDX89427 Canola mitochondrion 81.85 83.79
Bra013883.1-P Field mustard mitochondrion 77.61 75.85
VIT_16s0022g00980.t01 Wine grape mitochondrion 60.62 65.97
KRH39992 Soybean mitochondrion 57.92 64.94
KRH23793 Soybean mitochondrion 57.53 63.14
Solyc03g083610.2.1 Tomato mitochondrion, plastid 51.35 56.12
AT5G26667.1 Thale cress cytosol 44.02 54.81
AT3G60961.1 Thale cress cytosol 28.19 53.68
GSMUA_Achr4P18070_001 Banana cytosol, plastid 50.97 53.66
Zm00001d024919_P001 Maize mitochondrion 42.08 53.43
AT3G60180.1 Thale cress cytosol 41.31 52.45
TraesCS2A01G036500.1 Wheat mitochondrion 47.49 50.62
TraesCS2D01G035600.1 Wheat mitochondrion 47.1 50.41
EES10340 Sorghum mitochondrion 48.26 50.0
HORVU2Hr1G005480.2 Barley mitochondrion 46.72 49.79
TraesCS2B01G049600.1 Wheat mitochondrion 46.33 49.38
Os04t0105500-02 Rice mitochondrion 49.42 45.55
PGSC0003DMT400049085 Potato mitochondrion 47.88 39.24
AT5G50370.1 Thale cress cytosol 21.62 22.58
AT5G63400.1 Thale cress cytosol 21.24 22.36
AT5G47840.1 Thale cress plastid 23.94 21.91
AT2G37250.1 Thale cress mitochondrion 23.55 21.48
AT2G39270.1 Thale cress mitochondrion, plastid 22.01 19.32
AT3G01820.1 Thale cress mitochondrion 15.83 15.59
AT5G35170.1 Thale cress plastid 22.78 10.03
Protein Annotations
KEGG:00230+2.7.4.3KEGG:00240+2.7.4.14KEGG:00730+2.7.4.3KEGG:00983+2.7.4.14Gene3D:3.40.50.300MapMan:6.2.3.1
EntrezGene:828631ProteinID:AEE85034.2ProteinID:ANM66837.1ArrayExpress:AT4G25280EnsemblPlantsGene:AT4G25280RefSeq:AT4G25280
TAIR:AT4G25280RefSeq:AT4G25280-TAIR-GEnsemblPlants:AT4G25280.1TAIR:AT4G25280.1InterPro:Adenylat/UMP-CMP_kinInterPro:Adenylat_kinase_CS
Unigene:At.43141EMBL:BT010930EMBL:BT011652ProteinID:CAA23069.1ProteinID:CAB81339.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004127GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0006139GO:GO:0006207
GO:GO:0006221GO:GO:0008150GO:GO:0008152GO:GO:0009041GO:GO:0009058GO:GO:0009987
GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0016787GO:GO:0019205GO:GO:0046939
GO:GO:0046940HAMAP:MF_00235HAMAP:MF_03172RefSeq:NP_001320061.1RefSeq:NP_194258.3InterPro:P-loop_NTPase
PFAM:PF00406PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001016
PO:PO:0001017PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025195PO:PO:0025281PRINTS:PR00094ScanProsite:PS00113
PANTHER:PTHR23359PANTHER:PTHR23359:SF118UniProt:Q6NMK6SUPFAM:SSF52540TIGRFAMs:TIGR01359InterPro:UMP_CMP_kinase
UniParc:UPI000848CF51SEG:seg::::
Description
UMK2P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT4G25280]
Coordinates
chr4:-:12938956..12941207
Molecular Weight (calculated)
29047.0 Da
IEP (calculated)
8.692
GRAVY (calculated)
-0.309
Length
259 amino acids
Sequence
(BLAST)
001: MWRRVALLSP MISSSSRSLK LSQAASGLKV GESFATDIIS QEERVSPPKE KAPFITFVLG GPGSGKGTQC EKIVETFGLQ HLSAGDLLRR EIAMHTENGA
101: MILNLIKDGK IVPSEVTVKL IQKELESSDN RKFLIDGFPR TEENRVAFER IIRADPDVVL FFDCPEEEMV KRVLNRNQGR IDDNITTMKK RLKIFNALNR
201: PVIDYYKNKG KLYTINAVGT VDDIFQHVLP IFNSFEQLKE SSHVNPQSHL GSSLVENSS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.