Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G60180.1 | Thale cress | cytosol | 95.59 | 63.73 |
| CDY41189 | Canola | cytosol | 88.24 | 58.54 |
| Bra007512.1-P | Field mustard | cytosol | 88.24 | 57.69 |
| AT5G26667.1 | Thale cress | cytosol | 69.85 | 45.67 |
| VIT_15s0045g01310.t01 | Wine grape | cytosol | 69.12 | 44.76 |
| GSMUA_Achr4P11630_001 | Banana | cytosol | 68.38 | 44.71 |
| EES14324 | Sorghum | cytosol | 68.38 | 43.87 |
| Os02t0778400-01 | Rice | cytosol | 68.38 | 43.46 |
| GSMUA_Achr4P12240_001 | Banana | cytosol | 65.44 | 43.41 |
| GSMUA_Achr3P27510_001 | Banana | cytosol | 67.65 | 43.4 |
| TraesCS2A01G161300.1 | Wheat | cytosol | 65.44 | 43.0 |
| Os07t0624700-01 | Rice | cytosol, extracellular | 66.18 | 42.86 |
| EES05888 | Sorghum | cytosol | 66.18 | 42.25 |
| TraesCS2B01G187300.1 | Wheat | cytosol | 65.44 | 41.78 |
| TraesCS2D01G168400.1 | Wheat | cytosol | 65.44 | 41.78 |
| TraesCS7A01G163500.1 | Wheat | cytosol | 65.44 | 41.59 |
| TraesCS7B01G069300.1 | Wheat | cytosol | 65.44 | 41.59 |
| KRH48911 | Soybean | nucleus | 72.06 | 41.53 |
| TraesCS7D01G165600.1 | Wheat | cytosol | 66.18 | 41.28 |
| KRH66383 | Soybean | cytosol, endoplasmic reticulum | 71.32 | 41.1 |
| HORVU2Hr1G029350.10 | Barley | endoplasmic reticulum | 65.44 | 39.73 |
| Zm00001d052108_P003 | Maize | cytosol | 66.18 | 38.79 |
| Zm00001d018277_P002 | Maize | cytosol | 64.71 | 38.77 |
| PGSC0003DMT400062219 | Potato | cytosol | 58.82 | 37.04 |
| Solyc08g077300.2.1 | Tomato | cytosol, plastid | 58.82 | 37.04 |
| KXG19119 | Sorghum | cytosol | 61.76 | 35.29 |
| CDX71833 | Canola | cytosol | 36.76 | 34.72 |
| GSMUA_Achr10P... | Banana | cytosol | 63.24 | 34.54 |
| Zm00001d035916_P001 | Maize | cytosol | 55.15 | 33.78 |
| Os06t0109600-01 | Rice | cytosol, plasma membrane | 57.35 | 32.1 |
| TraesCS3D01G138500.1 | Wheat | cytosol | 56.62 | 32.08 |
| TraesCS3A01G137600.1 | Wheat | cytosol | 56.62 | 32.08 |
| TraesCS3B01G155300.1 | Wheat | cytosol | 55.88 | 31.67 |
| AT4G25280.1 | Thale cress | mitochondrion | 53.68 | 28.19 |
| HORVU3Hr1G026180.16 | Barley | mitochondrion | 55.88 | 25.42 |
| Os06t0203500-01 | Rice | mitochondrion | 26.47 | 24.49 |
| HORVU7Hr1G034340.5 | Barley | cytosol, nucleus, plastid | 64.71 | 22.45 |
| AT5G63400.1 | Thale cress | cytosol | 27.21 | 15.04 |
| AT5G50370.1 | Thale cress | cytosol | 27.21 | 14.92 |
| AT2G37250.1 | Thale cress | mitochondrion | 28.68 | 13.73 |
| AT5G47840.1 | Thale cress | plastid | 25.74 | 12.37 |
| AT2G39270.1 | Thale cress | mitochondrion, plastid | 25.0 | 11.53 |
| AT3G01820.1 | Thale cress | mitochondrion | 17.65 | 9.13 |
| AT5G35170.1 | Thale cress | plastid | 27.21 | 6.29 |
Protein Annotations
| KEGG:00230+2.7.4.3 | KEGG:00730+2.7.4.3 | Gene3D:3.40.50.300 | MapMan:6.2.3.1 | EntrezGene:6241017 | ProteinID:AEE80131.1 |
| ArrayExpress:AT3G60961 | EnsemblPlantsGene:AT3G60961 | RefSeq:AT3G60961 | TAIR:AT3G60961 | RefSeq:AT3G60961-TAIR-G | EnsemblPlants:AT3G60961.1 |
| TAIR:AT3G60961.1 | InterPro:Adenylat/UMP-CMP_kin | InterPro:Adenylat_kinase_CS | Unigene:At.73554 | UniProt:B3H4S0 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0016787 |
| GO:GO:0019205 | HAMAP:MF_00235 | RefSeq:NP_001118870.1 | InterPro:P-loop_NTPase | PFAM:PF00406 | PO:PO:0000293 |
| PRINTS:PR00094 | ScanProsite:PS00113 | PANTHER:PTHR23359 | PANTHER:PTHR23359:SF150 | SUPFAM:SSF52540 | UniParc:UPI0001739351 |
Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:B3H4S0]
Coordinates
chr3:+:22541319..22552529
Molecular Weight (calculated)
15743.9 Da
IEP (calculated)
4.916
GRAVY (calculated)
-0.326
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MIAEGRIVPS EITVKLLCKA MEESFQVSGN DKFLIDGFPR NEENRIVFEN VARIEPAFVL FFDCPEEELE RRIMSRNQGR EDDNIETIKK RFKVFVESTL
101: PIISYYQSKG KLRKINAAKS SEEVFEAVRV LFASET
101: PIISYYQSKG KLRKINAAKS SEEVFEAVRV LFASET
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.