Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G60961.1 | Thale cress | cytosol | 63.73 | 95.59 |
| CDY41189 | Canola | cytosol | 89.22 | 88.78 |
| Bra007512.1-P | Field mustard | cytosol | 79.9 | 78.37 |
| CDX71833 | Canola | cytosol | 53.92 | 76.39 |
| AT5G26667.1 | Thale cress | cytosol | 70.1 | 68.75 |
| VIT_15s0045g01310.t01 | Wine grape | cytosol | 70.59 | 68.57 |
| GSMUA_Achr4P11630_001 | Banana | cytosol | 67.65 | 66.35 |
| EES14324 | Sorghum | cytosol | 68.63 | 66.04 |
| Os07t0624700-01 | Rice | cytosol, extracellular | 67.65 | 65.71 |
| GSMUA_Achr3P27510_001 | Banana | cytosol | 68.14 | 65.57 |
| Os02t0778400-01 | Rice | cytosol | 68.63 | 65.42 |
| GSMUA_Achr4P12240_001 | Banana | cytosol | 65.69 | 65.37 |
| EES05888 | Sorghum | cytosol | 68.14 | 65.26 |
| TraesCS2D01G168400.1 | Wheat | cytosol | 67.16 | 64.32 |
| TraesCS2B01G187300.1 | Wheat | cytosol | 67.16 | 64.32 |
| TraesCS2A01G161300.1 | Wheat | cytosol | 64.71 | 63.77 |
| TraesCS7A01G163500.1 | Wheat | cytosol | 66.18 | 63.08 |
| TraesCS7B01G069300.1 | Wheat | cytosol | 65.69 | 62.62 |
| TraesCS7D01G165600.1 | Wheat | cytosol | 66.67 | 62.39 |
| KRH66383 | Soybean | cytosol, endoplasmic reticulum | 72.06 | 62.29 |
| KRH48911 | Soybean | nucleus | 72.06 | 62.29 |
| Zm00001d052108_P003 | Maize | cytosol | 68.14 | 59.91 |
| Zm00001d018277_P002 | Maize | cytosol | 66.67 | 59.91 |
| HORVU2Hr1G029350.10 | Barley | endoplasmic reticulum | 65.2 | 59.38 |
| PGSC0003DMT400062219 | Potato | cytosol | 57.35 | 54.17 |
| KXG19119 | Sorghum | cytosol | 62.25 | 53.36 |
| Solyc08g077300.2.1 | Tomato | cytosol, plastid | 56.37 | 53.24 |
| GSMUA_Achr10P... | Banana | cytosol | 63.73 | 52.21 |
| Os06t0203500-01 | Rice | mitochondrion | 36.76 | 51.02 |
| TraesCS3D01G138500.1 | Wheat | cytosol | 58.82 | 50.0 |
| TraesCS3A01G137600.1 | Wheat | cytosol | 58.82 | 50.0 |
| Os06t0109600-01 | Rice | cytosol, plasma membrane | 58.82 | 49.38 |
| TraesCS3B01G155300.1 | Wheat | cytosol | 57.84 | 49.17 |
| Zm00001d035916_P001 | Maize | cytosol | 51.96 | 47.75 |
| AT4G25280.1 | Thale cress | mitochondrion | 52.45 | 41.31 |
| HORVU3Hr1G026180.16 | Barley | mitochondrion | 56.86 | 38.8 |
| HORVU7Hr1G034340.5 | Barley | cytosol, nucleus, plastid | 65.69 | 34.18 |
| AT5G63400.1 | Thale cress | cytosol | 28.92 | 23.98 |
| AT5G50370.1 | Thale cress | cytosol | 28.92 | 23.79 |
| AT5G47840.1 | Thale cress | plastid | 31.86 | 22.97 |
| AT2G37250.1 | Thale cress | mitochondrion | 28.43 | 20.42 |
| AT2G39270.1 | Thale cress | mitochondrion, plastid | 25.49 | 17.63 |
| AT3G01820.1 | Thale cress | mitochondrion | 19.61 | 15.21 |
| AT5G35170.1 | Thale cress | plastid | 30.88 | 10.71 |
Protein Annotations
| KEGG:00230+2.7.4.3 | KEGG:00240+2.7.4.14 | KEGG:00730+2.7.4.3 | KEGG:00983+2.7.4.14 | Gene3D:3.40.50.300 | MapMan:6.2.3.1 |
| EntrezGene:825188 | ProteinID:AEE80020.1 | ProteinID:AEE80021.1 | ArrayExpress:AT3G60180 | EnsemblPlantsGene:AT3G60180 | RefSeq:AT3G60180 |
| TAIR:AT3G60180 | RefSeq:AT3G60180-TAIR-G | EnsemblPlants:AT3G60180.1 | TAIR:AT3G60180.1 | EMBL:AY072358 | EMBL:AY114727 |
| InterPro:Adenylat/UMP-CMP_kin | InterPro:Adenylat_kinase_CS | Unigene:At.34484 | ProteinID:CAB75933.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004127 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006207 | GO:GO:0006221 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009041 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019205 | GO:GO:0046939 | GO:GO:0046940 | HAMAP:MF_00235 |
| HAMAP:MF_03172 | RefSeq:NP_567093.1 | RefSeq:NP_850726.1 | InterPro:P-loop_NTPase | PFAM:PF00406 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PRINTS:PR00094 | ScanProsite:PS00113 | PANTHER:PTHR23359 | PANTHER:PTHR23359:SF150 | UniProt:Q8VY84 |
| SUPFAM:SSF52540 | TIGRFAMs:TIGR01359 | InterPro:UMP_CMP_kinase | UniParc:UPI00000A9CC6 | SEG:seg | : |
Description
UMK1Probable UMP-CMP kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY84]
Coordinates
chr3:-:22242500..22244125
Molecular Weight (calculated)
23048.5 Da
IEP (calculated)
5.466
GRAVY (calculated)
-0.414
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: METPIDAPNK DEHECPRWKK STVVFVLGGP GSGKGTQCAN VVKHFSYTHF SAGDLLRAEI KSGSEFGAMI QSMIAEGRIV PSEITVKLLC KAMEESGNDK
101: FLIDGFPRNE ENRNVFENVA RIEPAFVLFF DCPEEELERR IMSRNQGRED DNIETIKKRF KVFVESTLPI ISYYESKGKL RKINAAKSSE EVFEAVRVLF
201: ASET
101: FLIDGFPRNE ENRNVFENVA RIEPAFVLFF DCPEEELERR IMSRNQGRED DNIETIKKRF KVFVESTLPI ISYYESKGKL RKINAAKSSE EVFEAVRVLF
201: ASET
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.