Factsheet for Os06t0203500-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX71833	Canola	cytosol	51.7	52.78
Os02t0778400-01	Rice	cytosol	63.95	43.93
Os07t0624700-01	Rice	cytosol, extracellular	61.9	43.33
TraesCS7B01G069300.1	Wheat	cytosol	61.9	42.52
TraesCS7D01G165600.1	Wheat	cytosol	62.59	42.2
TraesCS7A01G163500.1	Wheat	cytosol	61.22	42.06
VIT_15s0045g01310.t01	Wine grape	cytosol	57.82	40.48
PGSC0003DMT400004310	Potato	cytosol	57.14	40.19
Solyc01g088480.2.1	Tomato	cytosol, plastid, unclear	56.46	39.71
GSMUA_Achr4P12240_001	Banana	cytosol	55.1	39.51
AT5G26667.1	Thale cress	cytosol	55.78	39.42
CDX87049	Canola	cytosol	55.78	39.23
Bra020536.1-P	Field mustard	cytosol	56.46	38.78
CDY19768	Canola	cytosol	55.1	38.76
Bra036580.1-P	Field mustard	cytosol	55.1	38.76
CDY65143	Canola	cytosol	56.46	38.6
CDY05528	Canola	cytosol	56.46	38.6
GSMUA_Achr4P11630_001	Banana	cytosol	54.42	38.46
CDY41189	Canola	cytosol	53.06	38.05
GSMUA_Achr3P27510_001	Banana	cytosol	53.74	37.26
AT3G60180.1	Thale cress	cytosol	51.02	36.76
Bra009898.1-P	Field mustard	cytosol	55.78	35.5
CDY61106	Canola	cytosol	55.78	35.19
KRH66383	Soybean	cytosol, endoplasmic reticulum	55.1	34.32
KRH48911	Soybean	nucleus	54.42	33.9
Bra007512.1-P	Field mustard	cytosol	47.62	33.65
CDX80561	Canola	cytosol	55.78	33.47
PGSC0003DMT400062219	Potato	cytosol	44.9	30.56
Solyc08g077300.2.1	Tomato	cytosol, plastid	43.54	29.63
GSMUA_Achr10P...	Banana	cytosol	48.3	28.51
AT3G60961.1	Thale cress	cytosol	24.49	26.47
Os06t0109600-01	Rice	cytosol, plasma membrane	43.54	26.34
HORVU7Hr1G034340.5	Barley	cytosol, nucleus, plastid	64.63	24.23
Os04t0105500-02	Rice	mitochondrion	45.58	23.84
Os08t0109300-01	Rice	plastid	27.89	14.14
Os12t0236400-01	Rice	mitochondrion	23.13	14.11
Os11t0312400-01	Rice	cytosol	23.13	13.99
Os11t0312220-00	Rice	mitochondrion	23.13	13.99
Os03t0130400-01	Rice	mitochondrion	25.17	12.63
Os08t0118900-01	Rice	mitochondrion	22.45	11.04
CDX87047	Canola	cytosol	2.72	5.56
Os08t0288200-01	Rice	cytosol, plasma membrane, plastid	14.97	4.46

Protein Annotations

KEGG:00230+2.7.4.3	KEGG:00730+2.7.4.3	Gene3D:3.40.50.300	MapMan:6.2.3.1	EMBL:AK106691	InterPro:Adenylat/UMP-CMP_kin
InterPro:Adenylat_kinase_CS	UniProt:B7EZK2	ProteinID:BAS96674.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019205	EnsemblPlantsGene:Os06g0203500	EnsemblPlants:Os06t0203500-01
InterPro:P-loop_NTPase	PFAM:PF00406	PRINTS:PR00094	ScanProsite:PS00113	PANTHER:PTHR23359	PANTHER:PTHR23359:SF118
SUPFAM:SSF52540	UniParc:UPI0000E126F5	SEG:seg	:	:	:

Description

Similar to UMP-CMP kinase family protein. (Os06t0203500-01)

Coordinates

chr6:+:5221495..5225198

Molecular Weight (calculated)

16161.8 Da

IEP (calculated)

8.243

GRAVY (calculated)

0.005

Length

147 amino acids

Sequence
(BLAST)

001: MRGGLVASAR LLPRPLVRWF LQRRAQQDIN ENMLGGKKVK IIFVLGGPGS GKGTQCSNIV EHFGFIHLSA GELLRAEINS GSENGTMIDT IITEGKIVPS
101: EITIKLLQEA IIKGGNDKYI IDGFPRNEEN RVVFESVVSL LSLHCFE

Best Arabidopsis Sequence Match ( AT3G60180.2 )
(BLAST)

001: METPIDAPNK DEHECPRWKK STVVFVLGGP GSGKGTQCAN VVKHFSYTHF SAGDLLRAEI KSGSEFGAMI QSMIAEGRIV PSEITVKLLC KAMEESGNDK
101: FLIDGFPRNE ENRNVFENVA RIEPAFVLFF DCPEEELERR IMSRNQGRED DNIETIKKRF KVFVESTLPI ISYYESKGKL RKINAAKSSE EVFEAVRVLF
201: ASET

Arabidopsis Description

UMK1Probable UMP-CMP kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY84]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.