Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G26667.1 | CDX70995 | AT5G22290.1 | 21798944 |
| AT5G26667.1 | CDX88803 | AT5G22290.1 | 21798944 |
| AT5G26667.1 | CDX92368 | AT5G22290.1 | 21798944 |
| AT5G26667.1 | CDY09128 | AT5G22290.1 | 21798944 |
| AT5G26667.1 | CDY35676 | AT5G22290.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19768 | Canola | cytosol | 84.98 | 94.74 |
| Bra009898.1-P | Field mustard | cytosol | 93.56 | 94.37 |
| CDX87049 | Canola | cytosol | 84.55 | 94.26 |
| CDY65143 | Canola | cytosol | 86.27 | 93.49 |
| CDY05528 | Canola | cytosol | 86.27 | 93.49 |
| CDX80561 | Canola | cytosol | 98.28 | 93.47 |
| AT5G26667.1 | Thale cress | cytosol | 81.97 | 91.83 |
| CDX87047 | Canola | cytosol | 27.9 | 90.28 |
| VIT_15s0045g01310.t01 | Wine grape | cytosol | 69.96 | 77.62 |
| Os07t0624700-01 | Rice | cytosol, extracellular | 69.96 | 77.62 |
| GSMUA_Achr4P12240_001 | Banana | cytosol | 67.38 | 76.59 |
| Os02t0778400-01 | Rice | cytosol | 69.96 | 76.17 |
| GSMUA_Achr4P11630_001 | Banana | cytosol | 67.81 | 75.96 |
| EES14324 | Sorghum | cytosol | 68.67 | 75.47 |
| TraesCS2D01G168400.1 | Wheat | cytosol | 68.24 | 74.65 |
| TraesCS2B01G187300.1 | Wheat | cytosol | 68.24 | 74.65 |
| TraesCS2A01G161300.1 | Wheat | cytosol | 66.09 | 74.4 |
| EES05888 | Sorghum | cytosol | 67.81 | 74.18 |
| KRH66383 | Soybean | cytosol, endoplasmic reticulum | 75.11 | 74.15 |
| KRH48911 | Soybean | nucleus | 74.68 | 73.73 |
| GSMUA_Achr3P27510_001 | Banana | cytosol | 66.09 | 72.64 |
| HORVU2Hr1G029350.10 | Barley | endoplasmic reticulum | 66.52 | 69.2 |
| CDY41189 | Canola | cytosol | 60.09 | 68.29 |
| Zm00001d018277_P002 | Maize | cytosol | 66.52 | 68.28 |
| TraesCS7B01G069300.1 | Wheat | cytosol | 61.8 | 67.29 |
| TraesCS7A01G163500.1 | Wheat | cytosol | 61.37 | 66.82 |
| Zm00001d052108_P003 | Maize | cytosol | 66.52 | 66.81 |
| TraesCS7D01G165600.1 | Wheat | cytosol | 60.52 | 64.68 |
| CDX71833 | Canola | cytosol | 38.2 | 61.81 |
| PGSC0003DMT400062219 | Potato | cytosol | 52.79 | 56.94 |
| Solyc08g077300.2.1 | Tomato | cytosol, plastid | 52.36 | 56.48 |
| Os06t0203500-01 | Rice | mitochondrion | 35.19 | 55.78 |
| KXG19119 | Sorghum | cytosol | 56.22 | 55.04 |
| GSMUA_Achr10P... | Banana | cytosol | 58.37 | 54.62 |
| TraesCS3D01G138500.1 | Wheat | cytosol | 54.08 | 52.5 |
| TraesCS3A01G137600.1 | Wheat | cytosol | 52.79 | 51.25 |
| TraesCS3B01G155300.1 | Wheat | cytosol | 51.93 | 50.42 |
| Os06t0109600-01 | Rice | cytosol, plasma membrane | 51.93 | 49.79 |
| Zm00001d035916_P001 | Maize | cytosol | 46.78 | 49.1 |
| CDX94461 | Canola | mitochondrion | 48.93 | 45.06 |
| CDX89427 | Canola | mitochondrion | 48.93 | 45.06 |
| HORVU3Hr1G026180.16 | Barley | mitochondrion | 51.5 | 40.13 |
| HORVU7Hr1G034340.5 | Barley | cytosol, nucleus, plastid | 61.8 | 36.73 |
| CDY34035 | Canola | cytosol | 25.75 | 24.49 |
| CDX83159 | Canola | cytosol | 25.75 | 24.49 |
| CDY41515 | Canola | cytosol | 24.89 | 24.17 |
| CDX84406 | Canola | cytosol | 24.89 | 24.17 |
| CDY48140 | Canola | cytosol | 24.46 | 23.75 |
| CDY16727 | Canola | cytosol | 24.03 | 23.33 |
| CDY58452 | Canola | plastid | 28.33 | 23.08 |
| CDY63236 | Canola | plastid | 23.18 | 21.09 |
| CDX86341 | Canola | plastid | 24.46 | 20.88 |
| CDX79727 | Canola | mitochondrion | 24.03 | 20.36 |
| CDY46767 | Canola | mitochondrion | 24.46 | 20.28 |
| CDY63499 | Canola | mitochondrion | 24.46 | 20.28 |
| CDY19972 | Canola | plastid | 25.75 | 20.2 |
| CDY18459 | Canola | plastid | 24.03 | 20.0 |
| CDY55438 | Canola | plastid | 24.03 | 20.0 |
| CDY70087 | Canola | plastid | 24.03 | 19.93 |
| CDX85310 | Canola | plastid | 25.75 | 19.54 |
| CDY44634 | Canola | plastid | 23.61 | 18.39 |
| CDX74861 | Canola | mitochondrion | 23.61 | 18.21 |
| CDX91924 | Canola | mitochondrion | 18.88 | 16.42 |
| CDX74321 | Canola | mitochondrion | 18.45 | 16.17 |
| CDY41765 | Canola | plastid | 26.61 | 10.78 |
| CDY58453 | Canola | cytosol | 1.29 | 0.98 |
Protein Annotations
| KEGG:00230+2.7.4.3 | KEGG:00240+2.7.4.14 | KEGG:00730+2.7.4.3 | KEGG:00983+2.7.4.14 | Gene3D:3.40.50.300 | MapMan:6.2.3.1 |
| GO:A0A078J8E8 | UniProt:A0A078J8E8 | InterPro:Adenylat/UMP-CMP_kin | InterPro:Adenylat_kinase_CS | EnsemblPlants:CDY61106 | ProteinID:CDY61106 |
| ProteinID:CDY61106.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004127 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0006139 | GO:GO:0006207 | GO:GO:0006221 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009041 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019205 |
| GO:GO:0046939 | GO:GO:0046940 | EnsemblPlantsGene:GSBRNA2T00030589001 | HAMAP:MF_00235 | HAMAP:MF_03172 | InterPro:P-loop_NTPase |
| PFAM:PF00406 | PRINTS:PR00094 | ScanProsite:PS00113 | PANTHER:PTHR23359 | PANTHER:PTHR23359:SF150 | MetaCyc:PWY-7176 |
| MetaCyc:PWY-7219 | SUPFAM:SSF52540 | TIGRFAMs:TIGR01359 | InterPro:UMP_CMP_kinase | UniPathway:UPA00588 | UniParc:UPI0004EF44DD |
Description
BnaA06g39400DUMP-CMP kinase [Source:UniProtKB/TrEMBL;Acc:A0A078J8E8]
Coordinates
chrLK033957:+:1422..4176
Molecular Weight (calculated)
25728.7 Da
IEP (calculated)
7.935
GRAVY (calculated)
-0.463
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSTVDAANK GVNGTASAKK PTVIFVLGGP GSGKGTQCAY IVEHYGYTHL SAGDLLRAEI KSGSENGTMI QNMIKEGKIV PSEVTIKLLQ KAIQENGNDK
101: FLIDGFPRNE ENRAAFEKVT EIEPKFVLFF DCPEEEMERR LLGRNQGRED DNIETIRKRF KVFLESSLPV IQYYEAKGKV RKIHAAKPIE DVFQEVKAVF
201: SPEAEKSNAK YLGTVINCRG QSSCSYEPKA AAS
101: FLIDGFPRNE ENRAAFEKVT EIEPKFVLFF DCPEEEMERR LLGRNQGRED DNIETIRKRF KVFLESSLPV IQYYEAKGKV RKIHAAKPIE DVFQEVKAVF
201: SPEAEKSNAK YLGTVINCRG QSSCSYEPKA AAS
001: MGSVDAANGS GKKPTVIFVL GGPGSGKGTQ CAYIVEHYGY THLSAGDLLR AEIKSGSENG TMIQNMIKEG KIVPSEVTIK LLQKAIQENG NDKFLIDGFP
101: RNEENRAAFE KVTEIEPKFV LFFDCPEEEM EKRLLGRNQG REDDNIETIR KRFKVFLESS LPVIHYYEAK GKVRKINAAK PIEAVFEEVK AIFSPEAEKV
201: EA
101: RNEENRAAFE KVTEIEPKFV LFFDCPEEEM EKRLLGRNQG REDDNIETIR KRFKVFLESS LPVIHYYEAK GKVRKINAAK PIEAVFEEVK AIFSPEAEKV
201: EA
Arabidopsis Description
PYR6UMP-CMP kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UDQ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.