CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89427	Canola	mitochondrion	96.05	96.05
AT4G25280.1	Thale cress	mitochondrion	85.38	83.4
VIT_16s0022g00980.t01	Wine grape	mitochondrion	63.64	67.65
KRH39992	Soybean	mitochondrion	55.73	61.04
KRH23793	Soybean	mitochondrion	55.73	59.75
Zm00001d024919_P001	Maize	mitochondrion	44.66	55.39
Solyc03g083610.2.1	Tomato	mitochondrion, plastid	51.78	55.27
CDY19768	Canola	cytosol	45.45	55.02
CDX87049	Canola	cytosol	45.06	54.55
GSMUA_Achr4P18070_001	Banana	cytosol, plastid	52.96	54.47
CDY65143	Canola	cytosol	45.85	53.95
CDY05528	Canola	cytosol	45.45	53.49
TraesCS2A01G036500.1	Wheat	mitochondrion	50.2	52.26
TraesCS2D01G035600.1	Wheat	mitochondrion	49.8	52.07
TraesCS2B01G049600.1	Wheat	mitochondrion	49.8	51.85
EES10340	Sorghum	mitochondrion	50.99	51.6
HORVU2Hr1G005480.2	Barley	mitochondrion	49.41	51.44
CDY41189	Canola	cytosol	40.32	49.76
CDY61106	Canola	cytosol	45.06	48.93
CDX80561	Canola	cytosol	45.85	47.35
CDX71833	Canola	cytosol	26.88	47.22
Os04t0105500-02	Rice	mitochondrion	51.38	46.26
CDX87047	Canola	cytosol	11.86	41.67
PGSC0003DMT400049085	Potato	mitochondrion	47.43	37.97
CDY48140	Canola	cytosol	22.13	23.33
CDY16727	Canola	cytosol	22.13	23.33
CDX83159	Canola	cytosol	22.13	22.86
CDY34035	Canola	cytosol	22.13	22.86
CDX79727	Canola	mitochondrion	24.51	22.55
CDY41515	Canola	cytosol	21.34	22.5
CDX84406	Canola	cytosol	21.34	22.5
CDY18459	Canola	plastid	24.9	22.5
CDY55438	Canola	plastid	24.9	22.5
CDY70087	Canola	plastid	24.9	22.42
CDY63499	Canola	mitochondrion	24.9	22.42
CDY46767	Canola	mitochondrion	24.9	22.42
CDY63236	Canola	plastid	22.53	22.27
CDY58452	Canola	plastid	24.11	21.33
CDY19972	Canola	plastid	24.11	20.54
CDX86341	Canola	plastid	21.74	20.15
CDX85310	Canola	plastid	23.72	19.54
CDY44634	Canola	plastid	22.92	19.4
CDX74861	Canola	mitochondrion	22.53	18.87
CDX74321	Canola	mitochondrion	17.79	16.92
CDX91924	Canola	mitochondrion	17.79	16.79
CDY41765	Canola	plastid	24.11	10.61
CDY58453	Canola	cytosol	1.19	0.98

Protein Annotations

KEGG:00230+2.7.4.3	KEGG:00240+2.7.4.14	KEGG:00730+2.7.4.3	KEGG:00983+2.7.4.14	Gene3D:3.40.50.300	MapMan:6.2.3.1
GO:A0A078DZ29	InterPro:Adenylat/UMP-CMP_kin	InterPro:Adenylat_kinase_CS	EnsemblPlants:CDX94461	ProteinID:CDX94461	ProteinID:CDX94461.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004127	GO:GO:0005488	GO:GO:0005524
GO:GO:0006139	GO:GO:0006207	GO:GO:0006221	GO:GO:0008150	GO:GO:0008152	GO:GO:0009041
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019205	EnsemblPlantsGene:GSBRNA2T00157632001
HAMAP:MF_00235	HAMAP:MF_03172	InterPro:P-loop_NTPase	PFAM:PF00406	PRINTS:PR00094	ScanProsite:PS00113
PANTHER:PTHR23359	PANTHER:PTHR23359:SF118	MetaCyc:PWY-7176	MetaCyc:PWY-7219	SUPFAM:SSF52540	TIGRFAMs:TIGR01359
InterPro:UMP_CMP_kinase	UniPathway:UPA00588	UniParc:UPI0004EAD73A	SEG:seg	:	:

Description

BnaC01g17230D

Coordinates

chrLK031881:+:1386434..1388188

Molecular Weight (calculated)

28333.2 Da

IEP (calculated)

9.425

GRAVY (calculated)

-0.349

Length

253 amino acids

Sequence
(BLAST)

001: MWRRVASLSP MISSSSPSRS LARNQAAFGL NIRESFATEI SKPEEGAKSP FITFVLGGPG SGKGTQCEKI VETFGLTHLS AGDLLRREIA MHTKNGDMIL
101: NLIKDGKIVP SEVTVKLLQK ELESSNSSKF LIDGFPRTEE NRVAFERIVG ADPDVVLFFD CPEEEMVKRV LNRNQGRVDD NITTMKKRLK IFEALNRPVI
201: DYYKNKGKLY TINAVGTVDD IFKQVLPIFT PFEEQLKQSR HVNPKSPLVE NSS

Best Arabidopsis Sequence Match ( AT4G25280.2 )
(BLAST)

001: MWRRVALLSP MISSSSRSLK LSQAASGLKV GESFATDIIS QEERVSPPKE KAPFITFVLG GPGSGKGTQC EKIVETFGLQ HLSAGDLLRR EIAMHTENGA
101: MILNLIKDGK IVPSEVTVKL IQKELESSDN RKFLIDGFPR TEENRVAFER IIRADPDVVL FFDCPEEEMV KRVLNRNQGR IDDNITTMKK RLKIFNALNR
201: PVIDYYKNKG KLYTINAVGT VDDIFQHVLP IFNSFEQLKE SSHVNPQSHL GSSLVENSS

Arabidopsis Description

UMK2P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT4G25280]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.