Factsheet for TraesCS2D01G035600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G005480.2	Barley	mitochondrion	97.11	96.71
TraesCS2A01G036500.1	Wheat	mitochondrion	96.69	96.3
TraesCS2B01G049600.1	Wheat	mitochondrion	96.28	95.88
EES10340	Sorghum	mitochondrion	78.51	76.0
Zm00001d024919_P001	Maize	mitochondrion	58.68	69.61
Os04t0105500-02	Rice	mitochondrion	76.86	66.19
VIT_16s0022g00980.t01	Wine grape	mitochondrion	54.96	55.88
KRH39992	Soybean	mitochondrion	52.07	54.55
KRH23793	Soybean	mitochondrion	51.65	52.97
GSMUA_Achr4P18070_001	Banana	cytosol, plastid	51.24	50.41
CDX94461	Canola	mitochondrion	52.07	49.8
CDX89427	Canola	mitochondrion	51.65	49.41
Solyc03g083610.2.1	Tomato	mitochondrion, plastid	48.35	49.37
TraesCS7D01G165600.1	Wheat	cytosol	44.21	49.08
TraesCS2D01G168400.1	Wheat	cytosol	42.98	48.83
AT4G25280.1	Thale cress	mitochondrion	50.41	47.1
Bra013883.1-P	Field mustard	mitochondrion	51.24	46.79
TraesCS3D01G138500.1	Wheat	cytosol	39.26	39.58
PGSC0003DMT400049085	Potato	mitochondrion	45.45	34.81
TraesCS7D01G319000.2	Wheat	plastid	27.27	23.16
TraesCS5D01G118800.1	Wheat	plastid	22.73	22.82
TraesCS7D01G378900.1	Wheat	cytosol	22.31	22.41
TraesCS2D01G549400.1	Wheat	mitochondrion	23.97	19.86
TraesCS4D01G321500.1	Wheat	mitochondrion	21.49	17.99
TraesCS7D01G312500.2	Wheat	mitochondrion	18.59	14.8
TraesCS6D01G077500.1	Wheat	plastid	23.55	9.63

Protein Annotations

KEGG:00230+2.7.4.3	KEGG:00240+2.7.4.14	KEGG:00730+2.7.4.3	KEGG:00983+2.7.4.14	Gene3D:3.40.50.300	MapMan:6.2.3.1
InterPro:Adenylat/UMP-CMP_kin	InterPro:Adenylat_kinase_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004127
GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0006207	GO:GO:0006221	GO:GO:0008150
GO:GO:0008152	GO:GO:0009041	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019205	HAMAP:MF_00235	InterPro:P-loop_NTPase	PFAM:PF00406	PRINTS:PR00094	ScanProsite:PS00113
PANTHER:PTHR23359	PANTHER:PTHR23359:SF118	SUPFAM:SSF52540	TIGRFAMs:TIGR01359	EnsemblPlantsGene:TraesCS2D01G035600	EnsemblPlants:TraesCS2D01G035600.1
InterPro:UMP_CMP_kinase	TIGR:cd01428	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2D:+:13580894..13584510

Molecular Weight (calculated)

26921.4 Da

IEP (calculated)

7.984

GRAVY (calculated)

-0.202

Length

242 amino acids

Sequence
(BLAST)

001: MLRRRLSSLL LRSPCSSAVA SSIQQQHHLI LPTHAEKPPA LNLLRLFTSL AGTDGDRPFI AFVLGGPGSG KGTQCSRIAS DFGFSHVSAG DLLRNEISAG
101: TDQGEWILEI IREGRIVPSE ITVELVRKAI ESSTAKRVLI DGFPRCEENR IAFEKITGTE PDLVLFFDCP EDEMVKRLLS RNQGRVDDNI ETIKKRLKVF
201: ESLNLPVVEY YSSRGKAHKI NATGTEDEIF EAVRKLFSSL RL

Best Arabidopsis Sequence Match ( AT4G25280.2 )
(BLAST)

001: MWRRVALLSP MISSSSRSLK LSQAASGLKV GESFATDIIS QEERVSPPKE KAPFITFVLG GPGSGKGTQC EKIVETFGLQ HLSAGDLLRR EIAMHTENGA
101: MILNLIKDGK IVPSEVTVKL IQKELESSDN RKFLIDGFPR TEENRVAFER IIRADPDVVL FFDCPEEEMV KRVLNRNQGR IDDNITTMKK RLKIFNALNR
201: PVIDYYKNKG KLYTINAVGT VDDIFQHVLP IFNSFEQLKE SSHVNPQSHL GSSLVENSS

Arabidopsis Description

UMK2P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT4G25280]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.