Factsheet for PGSC0003DMT400049085

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g083610.2.1	Tomato	mitochondrion, plastid	60.13	80.17
VIT_16s0022g00980.t01	Wine grape	mitochondrion	40.51	53.78
KRH39992	Soybean	mitochondrion	38.29	52.38
GSMUA_Achr4P18070_001	Banana	cytosol, plastid	39.87	51.22
KRH23793	Soybean	mitochondrion	37.66	50.42
PGSC0003DMT400004310	Potato	cytosol	32.28	48.8
Zm00001d024919_P001	Maize	mitochondrion	31.33	48.53
AT4G25280.1	Thale cress	mitochondrion	39.24	47.88
CDX94461	Canola	mitochondrion	37.97	47.43
CDX89427	Canola	mitochondrion	37.66	47.04
EES10340	Sorghum	mitochondrion	36.39	46.0
HORVU2Hr1G005480.2	Barley	mitochondrion	35.13	45.68
TraesCS2A01G036500.1	Wheat	mitochondrion	35.13	45.68
TraesCS2D01G035600.1	Wheat	mitochondrion	34.81	45.45
TraesCS2B01G049600.1	Wheat	mitochondrion	34.81	45.27
Bra013883.1-P	Field mustard	mitochondrion	37.34	44.53
PGSC0003DMT400062219	Potato	cytosol	30.06	43.98
Os04t0105500-02	Rice	mitochondrion	36.39	40.93
PGSC0003DMT400036202	Potato	plastid	21.84	23.23
PGSC0003DMT400067159	Potato	plastid	20.57	21.89
PGSC0003DMT400074574	Potato	mitochondrion	17.72	20.74
PGSC0003DMT400003152	Potato	cytosol	15.51	20.25
PGSC0003DMT400039275	Potato	mitochondrion	15.19	19.67
PGSC0003DMT400071737	Potato	plastid	17.41	19.1
PGSC0003DMT400034809	Potato	extracellular	13.29	14.84

Protein Annotations

KEGG:00230+2.7.4.3	KEGG:00240+2.7.4.14	KEGG:00730+2.7.4.3	KEGG:00983+2.7.4.14	Gene3D:3.40.50.300	MapMan:6.2.3.1
InterPro:Adenylat/UMP-CMP_kin	InterPro:Adenylat_kinase_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004127
GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0006207	GO:GO:0006221	GO:GO:0008150
GO:GO:0008152	GO:GO:0009041	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019205	GO:GO:0046939	GO:GO:0046940	UniProt:M1BN82	HAMAP:MF_00235
InterPro:P-loop_NTPase	PFAM:PF00406	EnsemblPlantsGene:PGSC0003DMG400019081	PGSC:PGSC0003DMG400019081	EnsemblPlants:PGSC0003DMT400049085	PRINTS:PR00094
ScanProsite:PS00113	PANTHER:PTHR23359	PANTHER:PTHR23359:SF118	SUPFAM:SSF52540	TIGRFAMs:TIGR01359	InterPro:UMP_CMP_kinase
UniParc:UPI000294C312	SEG:seg	:	:	:	:

Description

Uridylate kinase plant [Source:PGSC_GENE;Acc:PGSC0003DMG400019081]

Coordinates

chr3:-:40196912..40205413

Molecular Weight (calculated)

35931.9 Da

IEP (calculated)

8.554

GRAVY (calculated)

-0.551

Length

316 amino acids

Sequence
(BLAST)

001: MRTNLQGDKL AYNTNKLSYR HTRGNHTERN YDKRVENNDP STMKSKYEQR GKWKDPNPIY KELIGPESVA AFMRVNVQTE NGTPIKDVEA FHFTTSILFA
101: SSTGGPGSGK GTQCLKIAET FGFDHIGAGD LLRKEIHSDS ENGAMIQKLM KEGSIAPSEV TVKLIKKAIE SAENRKFLID GFPRSEENRV AYERIIGAEP
201: NFVLFFDCPE EVMVKRVLNR NEGRVDDNEH TVKERLKVYK AITLPVANHY AKKGKLYKVD GTGTQEEIFE RVRPIFASLR YILCSPAAML PSIYLHQDHD
301: FSELIYSFLQ LCFLPN

Best Arabidopsis Sequence Match ( AT4G25280.2 )
(BLAST)

001: MWRRVALLSP MISSSSRSLK LSQAASGLKV GESFATDIIS QEERVSPPKE KAPFITFVLG GPGSGKGTQC EKIVETFGLQ HLSAGDLLRR EIAMHTENGA
101: MILNLIKDGK IVPSEVTVKL IQKELESSDN RKFLIDGFPR TEENRVAFER IIRADPDVVL FFDCPEEEMV KRVLNRNQGR IDDNITTMKK RLKIFNALNR
201: PVIDYYKNKG KLYTINAVGT VDDIFQHVLP IFNSFEQLKE SSHVNPQSHL GSSLVENSS

Arabidopsis Description

UMK2P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT4G25280]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.