Factsheet for PGSC0003DMT400039275

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 4
plastid 3

Predictors

GFP

MS/MS

Papers

mitochondrion: 14983062

msms PMID: 14983062 doi

Y Balmer, WH Vensel, CK Tanaka, WJ Hurkman, E Gelhaye, N Rouhier, JP Jacquot, W Manieri, P Schürmann, M Droux, BB Buchanan

Department of Plant and Microbial Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g111200.2.1	Tomato	plastid	99.18	99.18
PGSC0003DMT400003152	Potato	cytosol	86.07	86.78
Os12t0236400-01	Rice	mitochondrion	84.84	85.89
GSMUA_Achr6P12440_001	Banana	cytosol	84.43	85.83
GSMUA_Achr10P...	Banana	cytosol	86.07	85.71
Zm00001d006926_P001	Maize	cytosol	41.39	84.87
KRH71729	Soybean	cytosol	34.02	84.69
VIT_17s0000g01730.t01	Wine grape	cytosol	84.84	84.49
AT5G63400.1	Thale cress	cytosol	80.74	80.08
Bra000623.1-P	Field mustard	cytosol	79.92	79.59
CDX83159	Canola	cytosol	79.92	79.59
CDY34035	Canola	cytosol	79.51	79.18
Bra035847.1-P	Field mustard	cytosol	77.87	79.17
CDY48140	Canola	cytosol	77.87	79.17
CDY41515	Canola	cytosol	77.87	79.17
CDY16727	Canola	cytosol	77.87	79.17
CDX84406	Canola	cytosol	77.46	78.75
Bra038628.1-P	Field mustard	cytosol	77.46	78.75
AT5G50370.1	Thale cress	cytosol	79.92	78.63
PGSC0003DMT400036202	Potato	plastid	33.61	27.61
PGSC0003DMT400067159	Potato	plastid	33.2	27.27
PGSC0003DMT400004310	Potato	cytosol	22.95	26.79
PGSC0003DMT400074574	Potato	mitochondrion	27.87	25.19
PGSC0003DMT400062219	Potato	cytosol	22.13	25.0
PGSC0003DMT400071737	Potato	plastid	28.28	23.96
PGSC0003DMT400049085	Potato	mitochondrion	19.67	15.19
PGSC0003DMT400034809	Potato	extracellular	16.8	14.49

Protein Annotations

KEGG:00230+2.7.4.3	KEGG:00730+2.7.4.3	EntrezGene:102587831	Gene3D:3.40.50.300	MapMan:6.1.3.1	InterPro:Adenyl_kin_sub
InterPro:Adenylat/UMP-CMP_kin	InterPro:Adenylat_kinase_CS	InterPro:Adenylate_kinase_lid-dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004017	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016776
GO:GO:0019205	GO:GO:0046939	GO:GO:0046940	UniProt:M1B815	HAMAP:MF_00235	InterPro:P-loop_NTPase
PFAM:PF00406	PFAM:PF05191	EnsemblPlantsGene:PGSC0003DMG400015187	PGSC:PGSC0003DMG400015187	EnsemblPlants:PGSC0003DMT400039275	PRINTS:PR00094
ScanProsite:PS00113	PANTHER:PTHR23359	PANTHER:PTHR23359:SF22	SUPFAM:SSF52540	TIGRFAMs:TIGR01351	UniParc:UPI0002963E81
RefSeq:XP_006351480.1	:	:	:	:	:

Description

Adenylate kinase B [Source:PGSC_GENE;Acc:PGSC0003DMG400015187]

Coordinates

chr3:-:50805849..50809925

Molecular Weight (calculated)

26616.3 Da

IEP (calculated)

8.610

GRAVY (calculated)

-0.282

Length

244 amino acids

Sequence
(BLAST)

001: MSTSSVNLED VPSESLMSEL LRRMRCSSKP DKRLILIGPP GSGKGTQSPI IKDEYCLCHL ATGDMLRAAV AAKTPLGIKA KEAMDKGELV SDDLVVGIID
101: EALKKPSCQK GFILDGFPRT VVQAEKLDVM LQSRGTKVDK VLNFAIDDAI LEERITGRWI HPASGRSYHT KFAPPKAPGI DDVTGEPLIQ RKDDTAAVLK
201: SRLEAFHRQT EPVIDYYAKK GNVVNLPAEK PPQAVTAEVK KVLS

Best Arabidopsis Sequence Match ( AT5G63400.1 )
(BLAST)

001: MATGGAAADL EDVQTVDLMS ELLRRLKCSQ KPDKRLIFIG PPGSGKGTQS PVVKDEYCLC HLSTGDMLRA AVASKTPLGV KAKEAMEKGE LVSDDLVVGI
101: IDEAMNKPKC QKGFILDGFP RTVTQAEKLD EMLKRRGTEI DKVLNFAIDD AILEERITGR WIHPSSGRSY HTKFAPPKTP GVDDITGEPL IQRKDDNADV
201: LKSRLAAFHS QTQPVIDYYA KKAVLTNIQA EKAPQEVTSE VKKALS

Arabidopsis Description

ADK1ADK1 [Source:UniProtKB/TrEMBL;Acc:A0A178UAM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.