Factsheet for Solyc03g111200.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 4
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

plastid: 22908117
plastid: 26371478
nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039275	Potato	mitochondrion	99.18	99.18
Solyc05g014980.2.1	Tomato	cytosol, extracellular, plastid	87.3	88.02
KRH71729	Soybean	cytosol	34.84	86.73
GSMUA_Achr6P12440_001	Banana	cytosol	84.84	86.25
GSMUA_Achr10P...	Banana	cytosol	86.48	86.12
Os12t0236400-01	Rice	mitochondrion	84.84	85.89
VIT_17s0000g01730.t01	Wine grape	cytosol	85.25	84.9
Zm00001d006926_P001	Maize	cytosol	41.39	84.87
AT5G63400.1	Thale cress	cytosol	80.74	80.08
CDX83159	Canola	cytosol	80.33	80.0
Bra000623.1-P	Field mustard	cytosol	80.33	80.0
CDY34035	Canola	cytosol	79.92	79.59
CDY41515	Canola	cytosol	77.87	79.17
CDY48140	Canola	cytosol	77.87	79.17
CDY16727	Canola	cytosol	77.87	79.17
Bra035847.1-P	Field mustard	cytosol	77.87	79.17
AT5G50370.1	Thale cress	cytosol	80.33	79.03
Bra038628.1-P	Field mustard	cytosol	77.46	78.75
CDX84406	Canola	cytosol	77.46	78.75
Solyc06g065270.2.1	Tomato	plastid	33.61	28.67
Solyc01g088480.2.1	Tomato	cytosol, plastid, unclear	23.36	27.27
Solyc08g077300.2.1	Tomato	cytosol, plastid	22.54	25.46
Solyc04g049690.2.1	Tomato	mitochondrion	27.87	25.28
Solyc09g007180.2.1	Tomato	plastid	28.28	24.56
Solyc03g083610.2.1	Tomato	mitochondrion, plastid	18.03	18.57
Solyc02g093990.2.1	Tomato	mitochondrion	15.98	15.06
Solyc03g005050.2.1	Tomato	extracellular, mitochondrion	16.8	14.49
Solyc12g010380.1.1	Tomato	plastid	33.2	13.37

Protein Annotations

KEGG:00230+2.7.4.3	KEGG:00730+2.7.4.3	Gene3D:3.40.50.300	MapMan:6.1.3.1	InterPro:Adenyl_kin_sub	InterPro:Adenylat/UMP-CMP_kin
InterPro:Adenylat_kinase_CS	InterPro:Adenylate_kinase_lid-dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004017
GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016776	GO:GO:0019205
GO:GO:0046939	GO:GO:0046940	UniProt:K4BJY3	HAMAP:MF_00235	InterPro:P-loop_NTPase	PFAM:PF00406
PFAM:PF05191	PRINTS:PR00094	ScanProsite:PS00113	PANTHER:PTHR23359	PANTHER:PTHR23359:SF22	SUPFAM:SSF52540
EnsemblPlantsGene:Solyc03g111200.2	EnsemblPlants:Solyc03g111200.2.1	TIGRFAMs:TIGR01351	UniParc:UPI0002768D15	:	:

Description

No Description!

Coordinates

chr3:-:61838312..61842194

Molecular Weight (calculated)

26671.4 Da

IEP (calculated)

8.610

GRAVY (calculated)

-0.283

Length

244 amino acids

Sequence
(BLAST)

001: MSTSSVNLED VPSESLMSEL LRRMRCSSKP DKRLILIGPP GSGKGTQSPI IKDEYCLCHL ATGDMLRAAV AAKTPLGIKA KEAMDKGELV SDDLVVGIID
101: EALKKPSCQK GFILDGFPRT VVQAEKLDVM LQNRGTKVDK VLNFAIDDAI LEERITGRWI HPASGRSYHT KFAPPKVPGI DDVTGEPLIQ RKDDTAAVLK
201: SRLEAFHRQT EPVIDYYAKK GNVVNLPAEK PPQAVTAEVK KVLS

Best Arabidopsis Sequence Match ( AT5G63400.1 )
(BLAST)

001: MATGGAAADL EDVQTVDLMS ELLRRLKCSQ KPDKRLIFIG PPGSGKGTQS PVVKDEYCLC HLSTGDMLRA AVASKTPLGV KAKEAMEKGE LVSDDLVVGI
101: IDEAMNKPKC QKGFILDGFP RTVTQAEKLD EMLKRRGTEI DKVLNFAIDD AILEERITGR WIHPSSGRSY HTKFAPPKTP GVDDITGEPL IQRKDDNADV
201: LKSRLAAFHS QTQPVIDYYA KKAVLTNIQA EKAPQEVTSE VKKALS

Arabidopsis Description

ADK1ADK1 [Source:UniProtKB/TrEMBL;Acc:A0A178UAM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.