Factsheet for Solyc05g014980.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 20363867
extracellular: 29876421

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003152	Potato	cytosol	98.35	98.35
Solyc03g111200.2.1	Tomato	plastid	88.02	87.3
GSMUA_Achr10P...	Banana	cytosol	87.6	86.53
GSMUA_Achr6P12440_001	Banana	cytosol	84.71	85.42
CDY41515	Canola	cytosol	78.93	79.58
AT5G63400.1	Thale cress	cytosol	80.58	79.27
CDY48140	Canola	cytosol	78.51	79.17
Bra038628.1-P	Field mustard	cytosol	78.51	79.17
CDX84406	Canola	cytosol	78.51	79.17
CDY16727	Canola	cytosol	78.1	78.75
Bra035847.1-P	Field mustard	cytosol	78.1	78.75
CDX83159	Canola	cytosol	77.69	76.73
Bra000623.1-P	Field mustard	cytosol	77.69	76.73
CDY34035	Canola	cytosol	77.27	76.33
AT5G50370.1	Thale cress	cytosol	77.27	75.4
Solyc06g065270.2.1	Tomato	plastid	33.88	28.67
Solyc01g088480.2.1	Tomato	cytosol, plastid, unclear	23.97	27.75
Solyc08g077300.2.1	Tomato	cytosol, plastid	23.97	26.85
Solyc04g049690.2.1	Tomato	mitochondrion	28.1	25.28
Solyc09g007180.2.1	Tomato	plastid	29.34	25.27
Solyc03g083610.2.1	Tomato	mitochondrion, plastid	19.01	19.41
Solyc02g093990.2.1	Tomato	mitochondrion	16.94	15.83
Solyc03g005050.2.1	Tomato	extracellular, mitochondrion	17.77	15.19
Solyc12g010380.1.1	Tomato	plastid	34.3	13.7

Protein Annotations

KEGG:00230+2.7.4.3	KEGG:00730+2.7.4.3	Gene3D:3.40.50.300	MapMan:6.1.3.1	InterPro:Adenyl_kin_sub	InterPro:Adenylat/UMP-CMP_kin
InterPro:Adenylat_kinase_CS	InterPro:Adenylate_kinase_lid-dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004017
GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016776	GO:GO:0019205
GO:GO:0046939	GO:GO:0046940	UniProt:K4BYL6	HAMAP:MF_00235	InterPro:P-loop_NTPase	PFAM:PF00406
PFAM:PF05191	PRINTS:PR00094	ScanProsite:PS00113	PANTHER:PTHR23359	PANTHER:PTHR23359:SF22	SUPFAM:SSF52540
EnsemblPlantsGene:Solyc05g014980.2	EnsemblPlants:Solyc05g014980.2.1	TIGRFAMs:TIGR01351	UniParc:UPI00027666D4	:	:

Description

No Description!

Coordinates

chr5:-:9188640..9193694

Molecular Weight (calculated)

26543.1 Da

IEP (calculated)

7.546

GRAVY (calculated)

-0.351

Length

242 amino acids

Sequence
(BLAST)

001: MAASLEDVPS ESLMSEVLRR LRCSSKPDKR LILIGPPGSG KGTQSPIIKD EYCLCHLATG DMLRAAVAAK TPLGIKAKEA MNNGELVSDD LVVGIIDEAM
101: KKPSCQKGFI LDGFPRTVVQ AEKLDEMLQK QGSKIDKVLN FAIDDAILEE RITGRWIHPS SGRSYHTKFQ PPKVPGVDDV TGEPLIQRKD DTAEVLKSRL
201: DAFHRQTEPV INYYSTKGVV ASLHAEKPPK EVTSEVKHVL SS

Best Arabidopsis Sequence Match ( AT5G63400.1 )
(BLAST)

001: MATGGAAADL EDVQTVDLMS ELLRRLKCSQ KPDKRLIFIG PPGSGKGTQS PVVKDEYCLC HLSTGDMLRA AVASKTPLGV KAKEAMEKGE LVSDDLVVGI
101: IDEAMNKPKC QKGFILDGFP RTVTQAEKLD EMLKRRGTEI DKVLNFAIDD AILEERITGR WIHPSSGRSY HTKFAPPKTP GVDDITGEPL IQRKDDNADV
201: LKSRLAAFHS QTQPVIDYYA KKAVLTNIQA EKAPQEVTSE VKKALS

Arabidopsis Description

ADK1ADK1 [Source:UniProtKB/TrEMBL;Acc:A0A178UAM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.