Factsheet for Solyc06g065270.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

plastid: 20363867
plastid: 22908117
extracellular: 29876421

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400067159	Potato	plastid	89.86	86.53
GSMUA_Achr10P...	Banana	cytosol	43.01	64.06
AT5G47840.1	Thale cress	plastid	62.24	62.9
CDY19972	Canola	plastid	63.29	60.94
KRH40035	Soybean	plastid	60.14	60.56
Bra036193.1-P	Field mustard	plastid	52.8	59.68
Bra037526.1-P	Field mustard	plastid	55.59	59.33
CDX86341	Canola	plastid	56.29	58.97
Os08t0109300-01	Rice	plastid	59.09	58.28
CDX85310	Canola	plastid	61.89	57.65
CDY63236	Canola	plastid	51.4	57.42
Zm00001d035034_P001	Maize	plastid	56.99	56.99
TraesCS7A01G322100.1	Wheat	plastid	56.64	56.84
TraesCS7D01G319000.2	Wheat	plastid	56.29	56.49
TraesCS7B01G223000.1	Wheat	plastid	56.29	56.29
GSMUA_Achr7P23490_001	Banana	plastid	59.79	55.52
EES14387	Sorghum	plastid	55.24	55.44
HORVU7Hr1G077220.1	Barley	mitochondrion, plastid	47.55	55.28
HORVU7Hr1G077170.5	Barley	mitochondrion, plastid	55.94	55.17
VIT_18s0041g01280.t01	Wine grape	mitochondrion, plastid	67.13	40.0
Solyc05g014980.2.1	Tomato	cytosol, extracellular, plastid	28.67	33.88
Solyc03g111200.2.1	Tomato	plastid	28.67	33.61
Solyc03g083610.2.1	Tomato	mitochondrion, plastid	23.08	27.85
Solyc01g088480.2.1	Tomato	cytosol, plastid, unclear	19.93	27.27
Solyc08g077300.2.1	Tomato	cytosol, plastid	18.18	24.07
Solyc09g007180.2.1	Tomato	plastid	23.43	23.84
Solyc12g010380.1.1	Tomato	plastid	48.25	22.77
Solyc04g049690.2.1	Tomato	mitochondrion	20.98	22.3
Solyc03g005050.2.1	Tomato	extracellular, mitochondrion	16.78	16.96
Solyc02g093990.2.1	Tomato	mitochondrion	13.64	15.06

Protein Annotations

KEGG:00230+2.7.4.3	KEGG:00730+2.7.4.3	Gene3D:3.40.50.300	MapMan:6.1.3.1	InterPro:Adenyl_kin_sub	InterPro:Adenylat/UMP-CMP_kin
InterPro:Adenylat_kinase_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004017	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016776	GO:GO:0019205
GO:GO:0046939	GO:GO:0046940	GO:GO:0097009	GO:GO:2000505	UniProt:K4C7F6	HAMAP:MF_00235
InterPro:P-loop_NTPase	PFAM:PF00406	PRINTS:PR00094	ScanProsite:PS00113	PANTHER:PTHR23359	PANTHER:PTHR23359:SF72
SUPFAM:SSF52540	EnsemblPlantsGene:Solyc06g065270.2	EnsemblPlants:Solyc06g065270.2.1	TIGRFAMs:TIGR01351	UniParc:UPI00027672B6	SEG:seg

Description

No Description!

Coordinates

chr6:-:40705359..40709638

Molecular Weight (calculated)

31972.4 Da

IEP (calculated)

7.421

GRAVY (calculated)

-0.342

Length

286 amino acids

Sequence
(BLAST)

001: MASCCSLSFS TVSSKPNKPY SSPISSSLEL PFTSQLPFSK KYSLYSNHTL LQTQCRKTQS PDCPSFLVVG SAKKQEPLRV MISGAPASGK GTQCELITKK
101: YDLVHIAAGD LLRAEIAAGT ENGRRAKEYM DKGQLVPNEI VVTMVKERLM CPDSQEKGWL LDGYPRSLSQ AVALKEFQPN LFILLEVPEE ILVERVVGRR
201: LDPVTGRIYH LKYSPPETDE IAARLTQRFD DTEEKVKLRL HTHRQNVESV LSMYKDTIFQ VDGSVSKEEV FAQIDGALTQ LLEAKE

Best Arabidopsis Sequence Match ( AT5G47840.1 )
(BLAST)

001: MTGCVNSISP PPVTLYRHRA SPSRSSFSLS GDALHSLYRH RRVSRSPSII APKFQIVAAE KSEPLKIMIS GAPASGKGTQ CELITHKYGL VHISAGDLLR
101: AEIASGSENG RRAKEHMEKG QLVPDEIVVM MVKDRLSQTD SEQKGWLLDG YPRSASQATA LKGFGFQPDL FIVLEVPEEI LIERVVGRRL DPVTGKIYHL
201: KYSPPETEEI AVRLTQRFDD TEEKAKLRLK THNQNVSDVL SMYDDITIKI EGNRSKEEVF AQIDSSLSEL LQERNTAPSS LLS

Arabidopsis Description

AMK2Adenylate kinase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FIJ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.