Factsheet for VIT_18s0041g01280.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g065270.2.1	Tomato	plastid	40.0	67.13
GSMUA_Achr10P...	Banana	cytosol	26.04	65.1
PGSC0003DMT400036202	Potato	plastid	39.38	63.64
AT5G47840.1	Thale cress	plastid	37.5	63.6
CDY19972	Canola	plastid	38.12	61.62
KRH40035	Soybean	plastid	36.04	60.92
Bra036193.1-P	Field mustard	plastid	31.88	60.47
PGSC0003DMT400067159	Potato	plastid	37.29	60.27
Bra037526.1-P	Field mustard	plastid	33.54	60.07
CDX86341	Canola	plastid	33.75	59.34
CDY63236	Canola	plastid	31.46	58.98
Zm00001d035034_P001	Maize	plastid	34.79	58.39
CDX85310	Canola	plastid	37.08	57.98
Os08t0109300-01	Rice	plastid	35.0	57.93
HORVU7Hr1G077220.1	Barley	mitochondrion, plastid	29.58	57.72
TraesCS7A01G322100.1	Wheat	plastid	33.96	57.19
TraesCS7B01G223000.1	Wheat	plastid	33.96	56.99
EES14387	Sorghum	plastid	33.75	56.84
GSMUA_Achr7P23490_001	Banana	plastid	36.25	56.49
HORVU7Hr1G077170.5	Barley	mitochondrion, plastid	33.96	56.21
TraesCS7D01G319000.2	Wheat	plastid	33.33	56.14
VIT_17s0000g01730.t01	Wine grape	cytosol	17.29	33.88
VIT_01s0010g02770.t01	Wine grape	cytosol	17.08	33.47
VIT_15s0045g01310.t01	Wine grape	cytosol	12.5	28.57
VIT_16s0022g00980.t01	Wine grape	mitochondrion	12.29	24.79
VIT_15s0048g02670.t01	Wine grape	plasma membrane	11.67	24.78
VIT_13s0067g03360.t01	Wine grape	plastid	14.38	24.13
VIT_11s0149g00040.t01	Wine grape	plastid	28.75	23.12
VIT_17s0000g01680.t01	Wine grape	mitochondrion	9.58	17.04
VIT_14s0171g00160.t01	Wine grape	mitochondrion	10.0	16.55

Protein Annotations

KEGG:00230+2.7.4.3	KEGG:00730+2.7.4.3	Gene3D:3.40.50.300	MapMan:6.1.3.1	InterPro:Adenyl_kin_sub	InterPro:Adenylat/UMP-CMP_kin
InterPro:Adenylat_kinase_CS	ProteinID:CCB61676	ProteinID:CCB61676.1	InterPro:DUF659	UniProt:F6I3V3	EMBL:FN596744
GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0004017
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0016776	GO:GO:0019205	GO:GO:0046939	GO:GO:0046940
GO:GO:0046983	HAMAP:MF_00235	InterPro:P-loop_NTPase	PFAM:PF00406	PFAM:PF04937	PRINTS:PR00094
ScanProsite:PS00113	PANTHER:PTHR23359	PANTHER:PTHR23359:SF72	InterPro:RNaseH-like_sf	SUPFAM:SSF52540	SUPFAM:SSF53098
TIGRFAMs:TIGR01351	UniParc:UPI0002108902	ArrayExpress:VIT_18s0041g01280	EnsemblPlantsGene:VIT_18s0041g01280	EnsemblPlants:VIT_18s0041g01280.t01	SEG:seg

Description

No Description!

Coordinates

chr18:+:25909353..25934857

Molecular Weight (calculated)

54037.9 Da

IEP (calculated)

10.334

GRAVY (calculated)

-0.324

Length

480 amino acids

Sequence
(BLAST)

001: MAFGHKYVML MHVTTKKVRR LGKRGILNSW RRLVIHRSTR ERERERGREQ MACFANLPMI SSPNPNPNPN LKASASLSQS SISTKLHFSS QFSSLSPSPL
101: SLRCNQTLIL RRFGGRAPSV SPTLVVVASA NPNSLKIMIS GAPASGKGTQ CELITKKHDL VHIAAGDLLR AEVAAGSENG RRAKEFMEKG KLVPNEIVVM
201: MVRDRLLQPD SQEKGWLLDG YPRSQSQATA LKEFGFEPDL FILLEVPEEI LVERVVGRRL DPVTGRIYHL KYSPPENEEI AARLTQRFDD TEEKVKLRLR
301: THHQNVEAVL SLYKDITIKG TMFMQSIDAS SMIKTGEKMF ELLDKWVEQV GEENVIQVIT DNHSSYVMAG RLLELKRPHL YWTPCAAHCL DLMLEDIGKL
401: PNIKRTLERA ISLNGYIYNR SGLLNMMRRF TGQRELLRPA KTRFATVNGG VSKEEVFAQI DSALEKLVKQ KKATAGPVAI

Best Arabidopsis Sequence Match ( AT5G47840.1 )
(BLAST)

001: MTGCVNSISP PPVTLYRHRA SPSRSSFSLS GDALHSLYRH RRVSRSPSII APKFQIVAAE KSEPLKIMIS GAPASGKGTQ CELITHKYGL VHISAGDLLR
101: AEIASGSENG RRAKEHMEKG QLVPDEIVVM MVKDRLSQTD SEQKGWLLDG YPRSASQATA LKGFGFQPDL FIVLEVPEEI LIERVVGRRL DPVTGKIYHL
201: KYSPPETEEI AVRLTQRFDD TEEKAKLRLK THNQNVSDVL SMYDDITIKI EGNRSKEEVF AQIDSSLSEL LQERNTAPSS LLS

Arabidopsis Description

AMK2Adenylate kinase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FIJ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.