Factsheet for VIT_11s0149g00040.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58453	Canola	cytosol	39.03	75.9
KRH37889	Soybean	plastid	73.03	73.03
KRH12898	Soybean	nucleus	73.7	72.97
Solyc12g010380.1.1	Tomato	plastid	71.86	70.79
Os08t0288200-01	Rice	cytosol, plasma membrane, plastid	57.12	69.17
CDY41765	Canola	plastid	65.66	68.17
Bra038939.1-P	Field mustard	plastid	58.12	67.38
AT5G35170.1	Thale cress	plastid	66.33	67.35
GSMUA_Achr4P04130_001	Banana	cytosol	62.65	67.27
KXG25051	Sorghum	plastid	63.65	63.87
TraesCS6A01G083900.1	Wheat	plastid	62.81	63.34
TraesCS6D01G077500.1	Wheat	plastid	62.81	63.34
Zm00001d050150_P001	Maize	plastid	59.46	62.39
CDY58452	Canola	plastid	28.14	58.74
HORVU6Hr1G014480.2	Barley	plastid	62.48	58.74
TraesCS6B01G113200.1	Wheat	mitochondrion	61.31	57.46
VIT_17s0000g01730.t01	Wine grape	cytosol	13.23	32.24
VIT_01s0010g02770.t01	Wine grape	cytosol	12.73	31.02
VIT_15s0045g01310.t01	Wine grape	cytosol	10.89	30.95
VIT_18s0041g01280.t01	Wine grape	mitochondrion, plastid	23.12	28.75
VIT_13s0067g03360.t01	Wine grape	plastid	11.89	24.83
VIT_16s0022g00980.t01	Wine grape	mitochondrion	9.55	23.95
VIT_15s0048g02670.t01	Wine grape	plasma membrane	8.88	23.45
VIT_14s0171g00160.t01	Wine grape	mitochondrion	8.71	17.93
VIT_17s0000g01680.t01	Wine grape	mitochondrion	6.7	14.81

Protein Annotations

KEGG:00230+2.7.4.3	KEGG:00730+2.7.4.3	EntrezGene:100256872	wikigene:100256872	Gene3D:3.40.50.300	MapMan:6.1.3.1
InterPro:Adenyl_kin_sub	InterPro:Adenylat/UMP-CMP_kin	InterPro:Adenylat_kinase_CS	ProteinID:CCB49943	ProteinID:CCB49943.1	ncoils:Coil
InterPro:DUF1995	UniProt:F6HCJ8	EMBL:FN595516	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004017	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009534	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009941	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016776	GO:GO:0019205
GO:GO:0046939	GO:GO:0046940	EntrezGene:LOC100256872	wikigene:LOC100256872	HAMAP:MF_00235	InterPro:P-loop_NTPase
PFAM:PF00406	PFAM:PF09353	PRINTS:PR00094	ScanProsite:PS00113	PANTHER:PTHR23359	PANTHER:PTHR23359:SF72
SUPFAM:SSF52540	TIGRFAMs:TIGR01351	UniParc:UPI000210906C	ArrayExpress:VIT_11s0149g00040	EnsemblPlantsGene:VIT_11s0149g00040	EnsemblPlants:VIT_11s0149g00040.t01
unigene:Vvi.22671	RefSeq:XP_002264815	RefSeq:XP_002264815.2	SEG:seg	:	:

Description

No Description!

Coordinates

chr11:+:6707937..6733170

Molecular Weight (calculated)

66822.6 Da

IEP (calculated)

8.284

GRAVY (calculated)

-0.288

Length

597 amino acids

Sequence
(BLAST)

001: MLQSSLAPPS HLHCTNLYSV PSLPPLCSLP LSFSSSSLSF GRRRCRRLSF GVHVDTHFSI NPEPKGLRVS CAISEPLKVM ISGAPASGKG TQCEMIVQKF
101: GLVHISTGDL LRSEVSSGSE IGNKAKEYMD TGRLVPDEVV IMMVTARISQ EDAKEKGWLL DGFPRTFAQA QSLEKLKIRP DVYIVLDVPD QILIDRCVGR
201: RVDPVTGKIY HLKFFPSENE EIKARLVTRS DDTEEKVKSR LEIYKKNAEA ILSTYSTIMN KVDGNHSKDE VFKPIDSLLS KMQQDKENMM KLEKSIRASE
301: RLSNLASSSQ ENWRGIPTRL NNIPHSREIR TYFYDDVLQA TQRAVNDGRT RLKVEINIPE LNPEMDVYRI GTLMELVRVL ALSFADDGKH VKVCVQGSMG
401: EGALAGMPLQ LAGTRKILEF MDWGDYGAKG TFINIGSIGS KEVEEQDDLF ILVAPQNAVG NCIIDDLKAM TDAAGNRPVI LVNPRLKDLP GSSGIMQTMG
501: RDKRLEYAAS FENCYFFRLL YYAGTQYPIM GAIRMSYPYR YELYKRVDES FGKEKYIILS TSSARPNIDE INDAFLGKPR SEAKKATGFW GFLSGIL

Best Arabidopsis Sequence Match ( AT5G35170.1 )
(BLAST)

001: MASLSLSSAH FSSTSSSSRS SISTSSLSPS STSLPLLQSP IRRRYRSLRR RLSFSVIPRR TSRSFSTSNS QIRCSINEPL KVMISGAPAS GKGTQCELIV
101: HKFGLVHIST GDLLRAEVSS GTDIGKRAKE FMNSGSLVPD EIVIAMVAGR LSREDAKEHG WLLDGFPRSF AQAQSLDKLN VKPDIFILLD VPDEILIDRC
201: VGRRLDPVTG KIYHIKNYPP ESDEIKARLV TRPDDTEEKV KARLQIYKQN SEAIISAYSD VMVKIDANRP KEVVFEETQT LLSQIQLKRM IKTDKASPVQ
301: DKWRGIPTRL NNIPHSRDIR AYFYEDVLQA TIRSIKDGNT RLRVDINIPE LNPEMDVYRI GTLMELVQAL ALSFADDGKR VKVCVQGSMG EGALAGMPLQ
401: LAGTRKILEY MDWGDDETLG TFVKLGAIGG KEVDEEDDMF ILVAPQNAVG NCIIDDLQAM TTAAGKRPVV LINPRLKDLP ASSGIMQTMG REQRLEYALT
501: FDNCYVFRLL YYLGTQYPIM GALRMSYPYR YELYKRVNEE NGKEKYVLLA TYAERPTPEQ IDDAFSGKSR DQSKKASGIW GFLSSVFS

Arabidopsis Description

Adenylate kinase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8VYL1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.