Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 6
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| extracellular:
28248230
|
msms PMID:
28248230
doi
National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India. aggarwal.pooja28@yahoo.com., National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India. arunima35@gmail.com., National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India. gayatrinarula@gmail.com., National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India. nchakraborty@nipgr.ac.in., National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India. schakraborty@nipgr.ac.in., National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India. sgblackpearl@gmail.com., National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India. subhrac@hotmail.com.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400012249 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G01820.1 | PGSC0003DMT400012249 | AT4G25200.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g005050.2.1 | Tomato | extracellular, mitochondrion | 96.82 | 96.82 |
| VIT_14s0171g00160.t01 | Wine grape | mitochondrion | 58.3 | 56.9 |
| AT3G01820.1 | Thale cress | mitochondrion | 51.59 | 55.51 |
| CDX91924 | Canola | mitochondrion | 52.3 | 55.22 |
| Bra000986.1-P | Field mustard | mitochondrion | 51.24 | 55.13 |
| CDX74321 | Canola | mitochondrion | 51.24 | 54.51 |
| KRH06982 | Soybean | mitochondrion | 51.24 | 54.1 |
| KRH75817 | Soybean | cytosol | 22.26 | 48.46 |
| GSMUA_Achr11P... | Banana | mitochondrion | 49.12 | 47.12 |
| GSMUA_Achr10P... | Banana | mitochondrion | 49.12 | 46.96 |
| KRG94482 | Soybean | plastid | 48.41 | 46.28 |
| Os08t0118900-01 | Rice | mitochondrion | 46.29 | 43.81 |
| TraesCS7A01G315500.1 | Wheat | mitochondrion | 45.58 | 42.43 |
| TraesCS7D01G312500.2 | Wheat | mitochondrion | 45.23 | 42.11 |
| TraesCS7B01G216500.1 | Wheat | mitochondrion | 44.88 | 41.78 |
| Zm00001d035124_P001 | Maize | mitochondrion | 43.46 | 41.69 |
| EES13280 | Sorghum | mitochondrion | 43.46 | 41.41 |
| PGSC0003DMT400074574 | Potato | mitochondrion | 32.51 | 34.07 |
| PGSC0003DMT400071737 | Potato | plastid | 34.28 | 33.68 |
| PGSC0003DMT400004310 | Potato | cytosol | 16.25 | 22.01 |
| PGSC0003DMT400062219 | Potato | cytosol | 15.19 | 19.91 |
| PGSC0003DMT400003152 | Potato | cytosol | 14.84 | 17.36 |
| PGSC0003DMT400039275 | Potato | mitochondrion | 14.49 | 16.8 |
| PGSC0003DMT400036202 | Potato | plastid | 17.31 | 16.5 |
| PGSC0003DMT400067159 | Potato | plastid | 16.96 | 16.16 |
| PGSC0003DMT400049085 | Potato | mitochondrion | 14.84 | 13.29 |
Protein Annotations
| KEGG:00230+2.7.4.3 | KEGG:00730+2.7.4.3 | Gene3D:3.40.50.300 | MapMan:6.1.3.1 | ProteinID:ABB02652 | ProteinID:ABB02652.1 |
| ProteinID:ABB16966 | ProteinID:ABB16966.1 | InterPro:Adenylat/UMP-CMP_kin | InterPro:Adenylat_kinase_CS | EMBL:DQ222521 | EMBL:DQ228316 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 |
| GO:GO:0019205 | UniProt:M1B1B2 | InterPro:P-loop_NTPase | PFAM:PF00406 | EnsemblPlantsGene:PGSC0003DMG400013379 | PGSC:PGSC0003DMG400013379 |
| EnsemblPlants:PGSC0003DMT400034809 | PRINTS:PR00094 | ScanProsite:PS00113 | PANTHER:PTHR23359 | PANTHER:PTHR23359:SF86 | SUPFAM:SSF52540 |
| UniParc:UPI0002956510 | SEG:seg | : | : | : | : |
Description
Adenylate kinase family [Source:PGSC_GENE;Acc:PGSC0003DMG400013379]
Coordinates
chr3:+:214737..217406
Molecular Weight (calculated)
31789.9 Da
IEP (calculated)
6.517
GRAVY (calculated)
-0.407
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MALLSRIRAA VQPLIRTESL RSYGSAAAQL VDYDYDDYEY EEYQNRSYVM EESEGSIPRR GVQWVIMGDP MAQRHVYAQW LSKLLDVPHI SMGSLVRQEL
101: HPRSSLYKQI ADAVNQGKLV PEEVIFGLLS KRLEEGYCSG ESGFILDGIP RSKIQAEILD KTVDIDLVLN LKCAEDLVSK KDKSTGLYPP LEFLRRGASG
201: ISTSRQPEGG HFRPSSIMDD VSRKNLHVHA EQVNPLEEYY RKQRKLLDFQ VAGGPGETWQ GLLAALHLQH RNAVGSTQLT AGC
101: HPRSSLYKQI ADAVNQGKLV PEEVIFGLLS KRLEEGYCSG ESGFILDGIP RSKIQAEILD KTVDIDLVLN LKCAEDLVSK KDKSTGLYPP LEFLRRGASG
201: ISTSRQPEGG HFRPSSIMDD VSRKNLHVHA EQVNPLEEYY RKQRKLLDFQ VAGGPGETWQ GLLAALHLQH RNAVGSTQLT AGC
001: MAWLSRVRGV SPVTRLAAIR RSFGSAAALE FDYDSDDEYL YGDDRRLAEP RLGLDGSGPD RGVQWVLMGA PGAWRHVFAE RLSKLLEVPH ISMGSLVRQE
101: LNPRSSLYKE IASAVNERKL VPKSVVFALL SKRLEEGYAR GETGFILHGI PRTRFQAETL DQIAQIDLVV NLKCSEDHLV NRNETALPQQ EFLGSMLHSP
201: VAINARRESV GVYAQEVEEY YRKQRKLLDF HVGGATSADT WQGLLAALHL KQVNLTTSQK LTL
101: LNPRSSLYKE IASAVNERKL VPKSVVFALL SKRLEEGYAR GETGFILHGI PRTRFQAETL DQIAQIDLVV NLKCSEDHLV NRNETALPQQ EFLGSMLHSP
201: VAINARRESV GVYAQEVEEY YRKQRKLLDF HVGGATSADT WQGLLAALHL KQVNLTTSQK LTL
Arabidopsis Description
Probable adenylate kinase 7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8L7W7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.