CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024919_P001	Maize	mitochondrion	66.8	81.86
TraesCS2A01G036500.1	Wheat	mitochondrion	78.0	80.25
HORVU2Hr1G005480.2	Barley	mitochondrion	76.4	78.6
TraesCS2D01G035600.1	Wheat	mitochondrion	76.0	78.51
TraesCS2B01G049600.1	Wheat	mitochondrion	76.0	78.19
Os04t0105500-02	Rice	mitochondrion	77.6	69.04
KRH39992	Soybean	mitochondrion	52.4	56.71
VIT_16s0022g00980.t01	Wine grape	mitochondrion	53.2	55.88
KRH23793	Soybean	mitochondrion	51.6	54.66
EES14324	Sorghum	cytosol	45.6	53.77
GSMUA_Achr4P18070_001	Banana	cytosol, plastid	52.4	53.25
EES05888	Sorghum	cytosol	44.8	52.58
CDX94461	Canola	mitochondrion	51.6	50.99
Solyc03g083610.2.1	Tomato	mitochondrion, plastid	48.0	50.63
CDX89427	Canola	mitochondrion	51.2	50.59
Bra013883.1-P	Field mustard	mitochondrion	51.2	48.3
AT4G25280.1	Thale cress	mitochondrion	50.0	48.26
KXG19119	Sorghum	cytosol	40.4	42.44
PGSC0003DMT400049085	Potato	mitochondrion	46.0	36.39
EES01149	Sorghum	cytosol	23.6	24.48
EES16935	Sorghum	cytosol	23.2	24.07
EES15893	Sorghum	cytosol	23.2	24.07
EES14387	Sorghum	plastid	26.0	22.81
EER95578	Sorghum	mitochondrion	22.0	19.1
OQU82545	Sorghum	mitochondrion	22.0	19.03
EES13280	Sorghum	mitochondrion	19.2	16.16
KXG25051	Sorghum	plastid	23.6	9.92

Protein Annotations

KEGG:00230+2.7.4.3	KEGG:00240+2.7.4.14	KEGG:00730+2.7.4.3	KEGG:00983+2.7.4.14	Gene3D:3.40.50.300	MapMan:6.2.3.1
EntrezGene:8056954	InterPro:Adenylat/UMP-CMP_kin	InterPro:Adenylat_kinase_CS	UniProt:C5YBA1	EnsemblPlants:EES10340	ProteinID:EES10340
ProteinID:EES10340.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004127	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006139	GO:GO:0006207	GO:GO:0006221	GO:GO:0008150	GO:GO:0008152	GO:GO:0009041
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019205
GO:GO:0046939	GO:GO:0046940	HAMAP:MF_00235	HAMAP:MF_03172	InterPro:P-loop_NTPase	PFAM:PF00406
PRINTS:PR00094	ScanProsite:PS00113	PFscan:PS51257	PANTHER:PTHR23359	PANTHER:PTHR23359:SF118	MetaCyc:PWY-7176
MetaCyc:PWY-7219	EnsemblPlantsGene:SORBI_3006G003300	SUPFAM:SSF52540	unigene:Sbi.10146	SignalP:SignalP-noTM	TIGRFAMs:TIGR01359
InterPro:UMP_CMP_kinase	UniParc:UPI0001A86BC2	RefSeq:XP_002446012.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:+:526239..530307

Molecular Weight (calculated)

27696.4 Da

IEP (calculated)

8.959

GRAVY (calculated)

-0.263

Length

250 amino acids

Sequence
(BLAST)

001: MWRRRVGALL LQSPLASSSS SSTAASSCQR LRHHLLPSEE PLALNRRLAR LFTSQDGSDG GDTQKPFIAF VLGGPGSGKG TQCTKIASDF GFAHLSAGDL
101: LRHEIASGSE KGELILDIIK EGRIVPSEIT VELIRKAMET KNAKRVLIDG FPRCEENRIA FEKIVGTEPD IVIFFDCPED EMVKRLLGRN QGRVDDNIET
201: IKKRLKVFES LNLPVVDYYS SRGKVHKINA TGTADEIFEA VRRLFSSLRL

Best Arabidopsis Sequence Match ( AT4G25280.2 )
(BLAST)

001: MWRRVALLSP MISSSSRSLK LSQAASGLKV GESFATDIIS QEERVSPPKE KAPFITFVLG GPGSGKGTQC EKIVETFGLQ HLSAGDLLRR EIAMHTENGA
101: MILNLIKDGK IVPSEVTVKL IQKELESSDN RKFLIDGFPR TEENRVAFER IIRADPDVVL FFDCPEEEMV KRVLNRNQGR IDDNITTMKK RLKIFNALNR
201: PVIDYYKNKG KLYTINAVGT VDDIFQHVLP IFNSFEQLKE SSHVNPQSHL GSSLVENSS

Arabidopsis Description

UMK2P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT4G25280]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.