Factsheet for Os06t0109600-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane

Predictor Summary:

cytosol 5
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19119	Sorghum	cytosol	75.72	77.31
TraesCS3D01G138500.1	Wheat	cytosol	74.49	75.42
TraesCS3B01G155300.1	Wheat	cytosol	74.07	75.0
TraesCS3A01G137600.1	Wheat	cytosol	74.07	75.0
GSMUA_Achr4P12240_001	Banana	cytosol	52.67	62.44
GSMUA_Achr4P11630_001	Banana	cytosol	53.09	62.02
Zm00001d035916_P001	Maize	cytosol	55.14	60.36
HORVU3Hr1G026180.16	Barley	mitochondrion	72.84	59.2
VIT_15s0045g01310.t01	Wine grape	cytosol	51.03	59.05
GSMUA_Achr3P27510_001	Banana	cytosol	51.44	58.96
AT3G60180.1	Thale cress	cytosol	49.38	58.82
Os07t0624700-01	Rice	cytosol, extracellular	50.21	58.1
AT5G26667.1	Thale cress	cytosol	49.38	57.69
Os02t0778400-01	Rice	cytosol	50.62	57.48
CDX87049	Canola	cytosol	49.38	57.42
Solyc01g088480.2.1	Tomato	cytosol, plastid, unclear	49.38	57.42
AT3G60961.1	Thale cress	cytosol	32.1	57.35
CDY41189	Canola	cytosol	48.15	57.07
CDY19768	Canola	cytosol	48.97	56.94
Bra036580.1-P	Field mustard	cytosol	48.97	56.94
PGSC0003DMT400004310	Potato	cytosol	48.97	56.94
CDY65143	Canola	cytosol	50.21	56.74
Bra020536.1-P	Field mustard	cytosol	49.38	56.07
CDY05528	Canola	cytosol	49.38	55.81
KRH48911	Soybean	nucleus	53.5	55.08
KRH66383	Soybean	cytosol, endoplasmic reticulum	53.09	54.66
PGSC0003DMT400062219	Potato	cytosol	47.74	53.7
Bra009898.1-P	Field mustard	cytosol	49.79	52.38
CDY61106	Canola	cytosol	49.79	51.93
Solyc08g077300.2.1	Tomato	cytosol, plastid	46.09	51.85
CDX71833	Canola	cytosol	30.45	51.39
Bra007512.1-P	Field mustard	cytosol	43.62	50.96
GSMUA_Achr10P...	Banana	cytosol	50.62	49.4
CDX80561	Canola	cytosol	49.79	49.39
CDX87047	Canola	cytosol	14.4	48.61
Os06t0203500-01	Rice	mitochondrion	26.34	43.54
Os04t0105500-02	Rice	mitochondrion	39.09	33.81
Os12t0236400-01	Rice	mitochondrion	25.93	26.14
Os11t0312220-00	Rice	mitochondrion	25.51	25.51
Os11t0312400-01	Rice	cytosol	25.51	25.51
Os08t0109300-01	Rice	plastid	23.05	19.31
Os08t0118900-01	Rice	mitochondrion	21.4	17.39
Os03t0130400-01	Rice	mitochondrion	20.58	17.06
Os08t0288200-01	Rice	cytosol, plasma membrane, plastid	20.58	10.14

Protein Annotations

KEGG:00230+2.7.4.3	KEGG:00240+2.7.4.14	KEGG:00730+2.7.4.3	KEGG:00983+2.7.4.14	Gene3D:3.40.50.300	EntrezGene:4339882
MapMan:6.2.3.1	EMBL:AK066989	InterPro:Adenylat/UMP-CMP_kin	InterPro:Adenylat_kinase_CS	ProteinID:BAD67693.1	ProteinID:BAD67896.1
ProteinID:BAF18492.1	ProteinID:BAS95779.1	ProteinID:EEE64963.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004127	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006207	GO:GO:0006221	GO:GO:0008150
GO:GO:0008152	GO:GO:0009041	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019205	GO:GO:0046939	GO:GO:0046940	HAMAP:MF_00235	HAMAP:MF_03172
EnsemblPlantsGene:Os06g0109600	EnsemblPlants:Os06t0109600-01	InterPro:P-loop_NTPase	PFAM:PF00406	PRINTS:PR00094	ScanProsite:PS00113
PANTHER:PTHR23359	PANTHER:PTHR23359:SF103	UniProt:Q5VRN0	SUPFAM:SSF52540	TIGRFAMs:TIGR01359	InterPro:UMP_CMP_kinase
UniParc:UPI0000457C4B	RefSeq:XP_015641837.1	RefSeq:XP_015641838.1	SEG:seg	:	:

Description

Similar to Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate kinase) (UMP kinase) (UMP/CMP kinase). (Os06t0109600-01)

Coordinates

chr6:+:564534..567658

Molecular Weight (calculated)

27948.4 Da

IEP (calculated)

8.620

GRAVY (calculated)

-0.628

Length

243 amino acids

Sequence
(BLAST)

001: MAHANKNHIE SFPPPGKKIT IVFVIGGPGS GKGTQCAKIV KQFGFTHLSA GDLLREEAKY DTEQGTMIKN LMNEGKLVSS DLIVKLLFKA MRESGNDKFL
101: VDGFPRNEEN RHAYENIIHI EPEFLLFIDC SKEEMERRIL NRNQGRDDDN IDTIRRRFDV FQQQTLPVIQ YYEKRGKLRK VDGNRQVDEV FEDVKAIFAQ
201: LNNQKIHGGQ QASGLSRAQM NPLKRWFFDF FCGCFGTKEE ARN

Best Arabidopsis Sequence Match ( AT5G26667.4 )
(BLAST)

001: MGSVDAANGS GKKPTVIFVL GGPGSGKGTQ CAYIVEHYGY THLSAGDLLR AEIKSGSENG TMIQNMIKEG KIVPSEVTIK LLQKAIQENG NDKFLIDGFP
101: RNEENRAAFE KVTEIEPKFV LFFDCPEEEM EKRLLGRNQG REDDNIETIR KRFKVFLESS LPVIHYYEAK GKVRKINAAK PIEAVFEEVK AIFSPEAEKV
201: EA

Arabidopsis Description

PYR6UMP-CMP kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UDQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.