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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, extracellular

Predictor Summary:
  • plastid 2
  • cytosol 1
  • extracellular 4
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra016421.1-P endoplasmic reticulum
Bra017916.1-P endoplasmic reticulum

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G21460.1 Bra016421.1-P AT1G21460.1 24027245
AT1G21460.1 Bra017916.1-P AT1G21460.1 24027245
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY50241 Canola extracellular, golgi, plasma membrane 99.19 99.19
Bra016421.1-P Field mustard golgi, plasma membrane 93.5 91.63
AT1G21460.1 Thale cress extracellular, golgi, plasma membrane 91.06 90.69
KRH64557 Soybean extracellular, golgi 71.95 71.66
VIT_18s0001g15330.t01 Wine grape golgi, plasma membrane 71.95 71.37
Solyc04g064610.2.1 Tomato plasma membrane 70.33 70.33
PGSC0003DMT400063855 Potato plasma membrane 71.14 69.17
KRH53378 Soybean golgi, plasma membrane 71.95 68.6
Solyc04g064620.2.1 Tomato extracellular, golgi, plasma membrane 68.29 68.57
KRH18105 Soybean plasma membrane 68.29 67.74
KRH15935 Soybean plasma membrane 69.51 67.32
GSMUA_Achr11P... Banana golgi, plasma membrane 62.6 61.85
TraesCS1A01G265200.1 Wheat golgi, plasma membrane, vacuole 65.04 61.07
TraesCS1B01G276000.1 Wheat golgi, plasma membrane, vacuole 64.63 60.92
Os05t0426000-01 Rice plasma membrane 64.23 60.54
TraesCS1D01G265400.1 Wheat golgi, plasma membrane, vacuole 64.23 60.54
Zm00001d038226_P001 Maize golgi, plasma membrane, vacuole 60.98 60.0
PGSC0003DMT400063850 Potato plasma membrane 68.29 59.57
EES19554 Sorghum golgi, plasma membrane 61.79 59.38
PGSC0003DMT400035874 Potato golgi, plasma membrane 47.56 58.79
GSMUA_Achr5P01260_001 Banana golgi, plasma membrane 61.38 58.75
TraesCS3D01G403300.1 Wheat plasma membrane 63.82 58.36
TraesCS3A01G408200.1 Wheat golgi, plasma membrane 63.41 57.56
TraesCS3B01G441800.1 Wheat golgi, plasma membrane 63.82 57.3
KXG33819 Sorghum extracellular, golgi 62.6 57.25
PGSC0003DMT400095936 Potato golgi, plasma membrane 54.06 57.08
Zm00001d000222_P001 Maize plasma membrane 61.38 56.55
Os01t0881300-02 Rice plasma membrane 62.6 56.41
Solyc06g060590.2.1 Tomato plasma membrane 57.32 55.08
Solyc04g064640.2.1 Tomato endoplasmic reticulum, golgi 54.47 54.92
PGSC0003DMT400035873 Potato plasma membrane 56.5 54.3
Solyc06g060580.1.1 Tomato golgi, plasma membrane 54.88 53.78
Solyc04g064630.2.1 Tomato golgi, plasma membrane 51.63 50.8
HORVU3Hr1G091230.10 Barley plasma membrane 55.69 46.92
Bra000725.1-P Field mustard plasma membrane 32.11 44.38
Bra035270.1-P Field mustard plasma membrane 43.5 42.97
Bra035879.1-P Field mustard extracellular, golgi, plasma membrane 41.06 42.08
Bra029245.1-P Field mustard extracellular, golgi, plasma membrane 40.24 41.25
Bra033034.1-P Field mustard plasma membrane 41.06 41.22
Bra025317.1-P Field mustard plasma membrane 41.46 41.13
Bra022636.1-P Field mustard golgi, plasma membrane 43.09 40.93
Bra025595.1-P Field mustard plasma membrane 38.62 39.92
Bra029244.1-P Field mustard plasma membrane 38.21 39.17
Bra021577.1-P Field mustard plasma membrane 37.4 38.98
Bra021190.1-P Field mustard plasma membrane 35.77 38.1
Bra027314.1-P Field mustard plasma membrane 32.93 37.67
Bra001638.1-P Field mustard plasma membrane 34.96 37.23
Bra012752.1-P Field mustard extracellular, golgi, vacuole 35.77 36.67
Bra012412.1-P Field mustard plasma membrane 25.61 36.0
Bra003075.1-P Field mustard golgi, plasma membrane, plastid 28.05 35.94
Bra010477.1-P Field mustard golgi, plasma membrane 36.59 33.09
Bra019560.1-P Field mustard plasma membrane 38.21 32.98
Bra018039.1-P Field mustard plasma membrane 38.21 32.53
Bra038060.1-P Field mustard extracellular, golgi, plasma membrane 32.11 32.38
Bra013854.1-P Field mustard golgi, plasma membrane 35.77 32.23
Bra026487.1-P Field mustard endoplasmic reticulum, plasma membrane 36.18 32.13
Bra029914.1-P Field mustard plasma membrane 37.8 32.07
Bra040489.1-P Field mustard golgi, plasma membrane 38.21 31.97
Bra009700.1-P Field mustard plasma membrane 36.99 31.6
Bra022761.1-P Field mustard golgi, plasma membrane 35.37 30.1
Bra023394.1-P Field mustard plasma membrane 36.18 29.97
Bra019197.1-P Field mustard plasma membrane 28.86 29.83
Bra000116.1-P Field mustard golgi, plasma membrane 31.3 28.52
Bra006185.1-P Field mustard golgi, plasma membrane, plastid 32.52 25.32
Bra008850.1-P Field mustard plasma membrane 20.73 24.4
Bra008206.1-P Field mustard nucleus 1.63 7.27
Protein Annotations
Gene3D:1.20.1280.290MapMan:24.2.6.1EnsemblPlantsGene:Bra017916EnsemblPlants:Bra017916.1EnsemblPlants:Bra017916.1-PGO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0008150
GO:GO:0008643GO:GO:0016020GO:GO:0016021GO:GO:0034219GO:GO:0051119UniProt:M4DN29
PFAM:PF03083PANTHER:PTHR10791PANTHER:PTHR10791:SF44InterPro:SWEET1InterPro:SWEET_sugar_transprTMHMM:TMhelix
UniParc:UPI000253F0C7SEG:seg::::
Description
AT1G21460 (E=1e-119) | nodulin MtN3 family protein
Coordinates
chrA06:-:8816082..8817313
Molecular Weight (calculated)
27186.8 Da
IEP (calculated)
9.623
GRAVY (calculated)
0.515
Length
246 amino acids
Sequence
(BLAST)
001: MNIAHTIFGV FGNATALFLF LAPSITFKRI IKNKSTEQFS GIPYPMTLLN CLLSAWYGLP FVSKDNTLVS TINGTGALIE TVYVLIFLFY APKKEKAKIF
101: GVFTAVLTVF ATVALVSLFA LHGNARKLFC GIAATVFSII MYASPLSIMR LVIKTKSVEY MPFFLSLFVF LCGTSWFIYG LIGRDPFVAI PNGFGCALGT
201: LQLILYVIYC GNKGEKSAEK DDKSLEMKGE EKKQNVVNGK QQEQQV
Best Arabidopsis Sequence Match ( AT1G21460.1 )
(BLAST)
001: MNIAHTIFGV FGNATALFLF LAPSITFKRI IKNKSTEQFS GIPYPMTLLN CLLSAWYGLP FVSKDNTLVS TINGTGAVIE TVYVLIFLFY APKKEKIKIF
101: GIFSCVLAVF ATVALVSLFA LQGNGRKLFC GLAATVFSII MYASPLSIMR LVVKTKSVEF MPFFLSLFVF LCGTSWFVYG LIGRDPFVAI PNGFGCALGT
201: LQLILYFIYC GNKGEKSADA QKDEKSVEMK DDEKKQNVVN GKQDLQV
Arabidopsis Description
SWEET1Bidirectional sugar transporter SWEET1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L9J7]
SUBAcon: [plasma membrane,golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.