Factsheet for GSMUA_Achr11P09020_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...	endoplasmic reticulum
GSMUA_Achr5P01260_001	endoplasmic reticulum

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G21460.1	GSMUA_Achr11P...	AT1G21460.1	24027245
AT1G21460.1	GSMUA_Achr5P01260_001	AT1G21460.1	24027245

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P01260_001	Banana	golgi, plasma membrane	74.7	72.37
EES19554	Sorghum	golgi, plasma membrane	67.47	65.62
KRH64557	Soybean	extracellular, golgi	65.06	65.59
Zm00001d038226_P001	Maize	golgi, plasma membrane, vacuole	65.46	65.2
VIT_18s0001g15330.t01	Wine grape	golgi, plasma membrane	64.26	64.52
KRH18105	Soybean	plasma membrane	63.86	64.11
TraesCS1B01G276000.1	Wheat	golgi, plasma membrane, vacuole	67.07	63.98
Os05t0426000-01	Rice	plasma membrane	66.27	63.22
TraesCS1D01G265400.1	Wheat	golgi, plasma membrane, vacuole	66.27	63.22
CDY04628	Canola	extracellular, golgi	62.25	63.01
Solyc04g064610.2.1	Tomato	plasma membrane	62.25	63.01
KRH15935	Soybean	plasma membrane	64.26	62.99
TraesCS1A01G265200.1	Wheat	golgi, plasma membrane, vacuole	66.27	62.98
KRH53378	Soybean	golgi, plasma membrane	65.06	62.79
CDY50241	Canola	extracellular, golgi, plasma membrane	61.85	62.6
Bra017916.1-P	Field mustard	extracellular, golgi	61.85	62.6
Solyc04g064620.2.1	Tomato	extracellular, golgi, plasma membrane	61.45	62.45
AT1G21460.1	Thale cress	extracellular, golgi, plasma membrane	61.85	62.35
KXG33819	Sorghum	extracellular, golgi	67.07	62.08
Os01t0881300-02	Rice	plasma membrane	67.87	61.9
PGSC0003DMT400063855	Potato	plasma membrane	62.65	61.66
Zm00001d000222_P001	Maize	plasma membrane	65.86	61.42
TraesCS3D01G403300.1	Wheat	plasma membrane	65.46	60.59
Bra016421.1-P	Field mustard	golgi, plasma membrane	61.04	60.56
CDX96591	Canola	golgi, plasma membrane	61.04	60.56
CDY67972	Canola	golgi, plasma membrane	61.04	60.56
TraesCS3A01G408200.1	Wheat	golgi, plasma membrane	65.06	59.78
TraesCS3B01G441800.1	Wheat	golgi, plasma membrane	65.46	59.49
PGSC0003DMT400063850	Potato	plasma membrane	61.45	54.26
Solyc04g064640.2.1	Tomato	endoplasmic reticulum, golgi	51.41	52.46
PGSC0003DMT400035874	Potato	golgi, plasma membrane	41.37	51.76
Solyc06g060590.2.1	Tomato	plasma membrane	51.41	50.0
Solyc04g064630.2.1	Tomato	golgi, plasma membrane	50.2	50.0
HORVU3Hr1G091230.10	Barley	plasma membrane	57.83	49.32
PGSC0003DMT400035873	Potato	plasma membrane	50.6	49.22
PGSC0003DMT400095936	Potato	golgi, plasma membrane	45.38	48.5
Solyc06g060580.1.1	Tomato	golgi, plasma membrane	48.19	47.81
GSMUA_Achr6P09180_001	Banana	plasma membrane	41.37	43.83
GSMUA_Achr3P08120_001	Banana	golgi, plasma membrane, vacuole	35.34	43.14
GSMUA_Achr10P...	Banana	extracellular, golgi, plasma membrane	40.16	42.73
GSMUA_Achr1P25290_001	Banana	plasma membrane, plastid	40.56	42.08
GSMUA_Achr10P...	Banana	golgi, plasma membrane, plastid	42.17	40.38
GSMUA_Achr8P25010_001	Banana	plastid	40.16	39.68
GSMUA_Achr8P10260_001	Banana	plasma membrane	38.15	39.09
GSMUA_Achr7P14690_001	Banana	golgi, plasma membrane, plastid	40.16	38.17
GSMUA_Achr1P12680_001	Banana	nucleus	40.16	36.23
GSMUA_Achr4P09090_001	Banana	plasma membrane	40.16	33.33
GSMUA_Achr3P08960_001	Banana	plasma membrane	34.14	32.57
GSMUA_AchrUn_...	Banana	golgi, plasma membrane	36.55	32.27
GSMUA_Achr11P...	Banana	plasma membrane	38.15	32.09
GSMUA_Achr3P18700_001	Banana	golgi, plasma membrane, plastid	35.34	31.32
GSMUA_Achr8P09230_001	Banana	golgi, plasma membrane	33.73	29.89
GSMUA_Achr6P07950_001	Banana	golgi, plasma membrane	34.54	29.86
GSMUA_Achr6P23850_001	Banana	golgi, plasma membrane	32.53	29.45
GSMUA_Achr9P17640_001	Banana	golgi, plasma membrane, vacuole	32.13	29.2
GSMUA_Achr3P32170_001	Banana	cytosol, peroxisome, plasma membrane	37.75	27.98
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	34.54	25.83
GSMUA_AchrUn_...	Banana	plasma membrane	26.1	25.69
GSMUA_Achr10P...	Banana	plasma membrane	34.14	25.45
GSMUA_Achr8P00620_001	Banana	plasma membrane, vacuole	35.74	25.36

Protein Annotations

Gene3D:1.20.1280.290	MapMan:24.2.6.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0008643	GO:GO:0016020	GO:GO:0016021
GO:GO:0034219	GO:GO:0051119	EnsemblPlantsGene:GSMUA_Achr11G09020_001	EnsemblPlants:GSMUA_Achr11P09020_001	EnsemblPlants:GSMUA_Achr11T09020_001	UniProt:M0RQN2
PFAM:PF03083	PANTHER:PTHR10791	PANTHER:PTHR10791:SF44	InterPro:SWEET1	InterPro:SWEET_sugar_transpr	TMHMM:TMhelix
UniParc:UPI0002964113	:	:	:	:	:

Description

Putative Protein RUPTURED POLLEN GRAIN 1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G09020_001]

Coordinates

chr11:+:6950455..6952552

Molecular Weight (calculated)

27433.0 Da

IEP (calculated)

9.587

GRAVY (calculated)

0.563

Length

249 amino acids

Sequence
(BLAST)

001: MEVVRFVFGI FGNATALFLF LSPLVTFQRI IRKRSTEDFS GVPYTMTLLN CLLSAWYGLP FVSPNNLLVS TINGAGSVIE AVYVLIFLVF APKKERARVA
101: ALFTFVLSVF AVIALVSLLA LRGQRRKIFC GFAAAIFSIC MYASPLSIMR LVIKTKSVEY MPFLLSLFVF LCGTSWFVYG LLGGDPFVTV PNGCGSALGA
201: IQLILYAIYR NHTTTDGGSE MNGQGHKRLE DDSRATEKKP DHQPIADKV

Best Arabidopsis Sequence Match ( AT1G21460.1 )
(BLAST)

001: MNIAHTIFGV FGNATALFLF LAPSITFKRI IKNKSTEQFS GIPYPMTLLN CLLSAWYGLP FVSKDNTLVS TINGTGAVIE TVYVLIFLFY APKKEKIKIF
101: GIFSCVLAVF ATVALVSLFA LQGNGRKLFC GLAATVFSII MYASPLSIMR LVVKTKSVEF MPFFLSLFVF LCGTSWFVYG LIGRDPFVAI PNGFGCALGT
201: LQLILYFIYC GNKGEKSADA QKDEKSVEMK DDEKKQNVVN GKQDLQV

Arabidopsis Description

SWEET1Bidirectional sugar transporter SWEET1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L9J7]
SUBAcon: [plasma membrane,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.