Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 7
- golgi 3
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d040656_P002 | Maize | golgi, plasma membrane, vacuole | 58.85 | 63.0 |
OQU86800 | Sorghum | golgi, plasma membrane, vacuole | 62.55 | 62.81 |
Zm00001d009071_P002 | Maize | plasma membrane | 61.73 | 62.76 |
VIT_05s0077g02260.t01 | Wine grape | golgi, plasma membrane, vacuole | 58.85 | 61.37 |
TraesCS5B01G040700.1 | Wheat | golgi, plasma membrane, vacuole | 60.49 | 60.0 |
GSMUA_Achr11P... | Banana | plasma membrane | 72.02 | 59.12 |
GSMUA_Achr3P08120_001 | Banana | golgi, plasma membrane, vacuole | 49.38 | 58.82 |
TraesCS5D01G046300.1 | Wheat | plasma membrane | 58.85 | 58.37 |
TraesCS5A01G038900.1 | Wheat | plasma membrane | 59.67 | 58.0 |
TraesCS5A01G039000.1 | Wheat | plasma membrane | 59.26 | 57.6 |
TraesCS5B01G040800.1 | Wheat | plasma membrane | 60.49 | 54.65 |
TraesCS5D01G046400.1 | Wheat | plasma membrane | 59.26 | 53.53 |
HORVU0Hr1G010080.2 | Barley | plasma membrane | 59.26 | 53.53 |
Solyc01g099870.1.1 | Tomato | plasma membrane, vacuole | 39.92 | 52.15 |
Bra012752.1-P | Field mustard | extracellular, golgi, vacuole | 50.62 | 51.25 |
CDX82395 | Canola | plasma membrane | 48.15 | 50.65 |
CDY34967 | Canola | plasma membrane | 48.15 | 50.65 |
Bra021190.1-P | Field mustard | plasma membrane | 48.15 | 50.65 |
Bra001638.1-P | Field mustard | plasma membrane | 48.15 | 50.65 |
CDX90555 | Canola | golgi, plasma membrane, vacuole | 49.79 | 50.42 |
CDY09729 | Canola | golgi, plasma membrane, vacuole | 49.38 | 50.0 |
KRH12074 | Soybean | plasma membrane | 50.21 | 49.8 |
AT4G15920.1 | Thale cress | plasma membrane | 48.97 | 49.38 |
KRH37080 | Soybean | plasma membrane | 49.38 | 49.18 |
CDX75890 | Canola | plasma membrane | 46.5 | 48.92 |
PGSC0003DMT400063714 | Potato | plasma membrane | 46.09 | 47.26 |
CDY24920 | Canola | extracellular, golgi, vacuole | 30.04 | 47.1 |
AT3G16690.3 | Thale cress | plasma membrane | 46.5 | 42.64 |
Bra038060.1-P | Field mustard | extracellular, golgi, plasma membrane | 42.8 | 42.62 |
GSMUA_Achr6P09180_001 | Banana | plasma membrane | 37.45 | 38.72 |
GSMUA_Achr11P... | Banana | golgi, plasma membrane | 39.09 | 38.15 |
GSMUA_Achr10P... | Banana | extracellular, golgi, plasma membrane | 35.8 | 37.18 |
GSMUA_Achr5P01260_001 | Banana | golgi, plasma membrane | 37.04 | 35.02 |
GSMUA_Achr3P08960_001 | Banana | plasma membrane | 37.04 | 34.48 |
GSMUA_Achr10P... | Banana | golgi, plasma membrane, plastid | 35.39 | 33.08 |
GSMUA_Achr8P25010_001 | Banana | plastid | 33.74 | 32.54 |
GSMUA_Achr6P07950_001 | Banana | golgi, plasma membrane | 37.86 | 31.94 |
GSMUA_Achr7P14690_001 | Banana | golgi, plasma membrane, plastid | 33.74 | 31.3 |
GSMUA_Achr1P25290_001 | Banana | plasma membrane, plastid | 30.86 | 31.25 |
GSMUA_Achr9P17640_001 | Banana | golgi, plasma membrane, vacuole | 34.98 | 31.02 |
GSMUA_Achr3P18700_001 | Banana | golgi, plasma membrane, plastid | 35.39 | 30.61 |
GSMUA_Achr4P09090_001 | Banana | plasma membrane | 36.21 | 29.33 |
GSMUA_Achr8P09230_001 | Banana | golgi, plasma membrane | 33.74 | 29.18 |
GSMUA_Achr6P23850_001 | Banana | golgi, plasma membrane | 32.92 | 29.09 |
GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 33.74 | 29.08 |
GSMUA_Achr1P12680_001 | Banana | nucleus | 31.69 | 27.9 |
GSMUA_Achr10P... | Banana | plasma membrane | 35.8 | 26.05 |
GSMUA_Achr8P00620_001 | Banana | plasma membrane, vacuole | 36.63 | 25.36 |
VIT_14s0060g01890.t01 | Wine grape | plasma membrane | 51.85 | 24.8 |
GSMUA_Achr3P32170_001 | Banana | cytosol, peroxisome, plasma membrane | 34.16 | 24.7 |
GSMUA_Achr11P... | Banana | plasma membrane, vacuole | 32.92 | 24.02 |
GSMUA_AchrUn_... | Banana | plasma membrane | 23.05 | 22.13 |
Bra008206.1-P | Field mustard | nucleus | 1.23 | 5.45 |
Protein Annotations
EnsemblPlants:GSMUA_Achr8P10260_001 | EnsemblPlants:GSMUA_Achr8T10260_001 | EnsemblPlantsGene:GSMUA_Achr8G10260_001 | Gene3D:1.20.1280.290 | GO:GO:0005575 | GO:GO:0006810 |
GO:GO:0008150 | GO:GO:0008643 | GO:GO:0016020 | GO:GO:0016021 | InterPro:SWEET_sugar_transpr | PANTHER:PTHR10791 |
PANTHER:PTHR10791:SF29 | PFAM:PF03083 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002965C81 | UniProt:M0TP79 |
MapMan:24.2.6.1 | : | : | : | : | : |
Description
Putative Protein RUPTURED POLLEN GRAIN 1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G10260_001]
Coordinates
chr8:-:7311167..7314053
Molecular Weight (calculated)
26519.6 Da
IEP (calculated)
5.555
GRAVY (calculated)
0.714
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MTYWSVNLAG NIISVLVFAS PIKTFWRIAR SGSTEDFESA PYVVTLLSSS LWVYYGITKP GGLLVATVNG VGVVMEAVYV TLFLLFATPQ LRAKTAVLVA
101: ALDVGFLGAV VLVTSLAVHG SLRVMVIGTI CACLNVFMYG SPLAAMKTVI TTKSVEYMPF FLSFFLFLNG GIWIVYAILD KDIFLGIPNG IGLILGTIQL
201: ILYLIYVNAK ASKQLGDSHE EEWQHQQLIN SNSEHEADEE AHI
101: ALDVGFLGAV VLVTSLAVHG SLRVMVIGTI CACLNVFMYG SPLAAMKTVI TTKSVEYMPF FLSFFLFLNG GIWIVYAILD KDIFLGIPNG IGLILGTIQL
201: ILYLIYVNAK ASKQLGDSHE EEWQHQQLIN SNSEHEADEE AHI
001: MAEASFYIGV IGNVISVLVF LSPVETFWKI VKRRSTEEYK SLPYICTLLG SSLWTYYGIV TPGEYLVSTV NGFGALVETI YVSLFLFYAP RHLKLKTVDV
101: EAMLNVFFPI AAIVATRSAF EDEKMRSQSI GFISAGLNII MYGSPLSAMK TVVTTKSVKY MPFWLSFFLF LNGAIWAVYA LLQHDVFLLV PNGVGFVFGT
201: MQLILYGIYR NAKPVGLSNG LSEIAQDEEE GLTSRVEPLL S
101: EAMLNVFFPI AAIVATRSAF EDEKMRSQSI GFISAGLNII MYGSPLSAMK TVVTTKSVKY MPFWLSFFLF LNGAIWAVYA LLQHDVFLLV PNGVGFVFGT
201: MQLILYGIYR NAKPVGLSNG LSEIAQDEEE GLTSRVEPLL S
Arabidopsis Description
SWEET17Nodulin MtN3 family protein [Source:TAIR;Acc:AT4G15920]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.