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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • nucleus 1
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:golgi
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012752.1-P Field mustard extracellular, golgi, vacuole 99.17 99.17
CDY09729 Canola golgi, plasma membrane, vacuole 97.92 97.92
AT4G15920.1 Thale cress plasma membrane 90.83 90.46
CDY24920 Canola extracellular, golgi, vacuole 57.92 89.68
CDY34967 Canola plasma membrane 72.5 75.32
CDX82395 Canola plasma membrane 71.25 74.03
CDX75890 Canola plasma membrane 70.42 73.16
VIT_05s0077g02260.t01 Wine grape golgi, plasma membrane, vacuole 59.58 61.37
KRH12074 Soybean plasma membrane 59.17 57.96
KRH37080 Soybean plasma membrane 57.92 56.97
Solyc01g099870.1.1 Tomato plasma membrane, vacuole 42.92 55.38
OQU86800 Sorghum golgi, plasma membrane, vacuole 51.25 50.83
Zm00001d040656_P002 Maize golgi, plasma membrane, vacuole 47.92 50.66
PGSC0003DMT400063714 Potato plasma membrane 50.0 50.63
Zm00001d009071_P002 Maize plasma membrane 50.42 50.63
GSMUA_Achr8P10260_001 Banana plasma membrane 50.42 49.79
TraesCS5B01G040700.1 Wheat golgi, plasma membrane, vacuole 49.58 48.57
TraesCS5D01G046300.1 Wheat plasma membrane 47.92 46.94
TraesCS5A01G038900.1 Wheat plasma membrane 48.75 46.8
TraesCS5A01G039000.1 Wheat plasma membrane 46.67 44.8
TraesCS5B01G040800.1 Wheat plasma membrane 49.58 44.24
HORVU0Hr1G010080.2 Barley plasma membrane 48.33 43.12
TraesCS5D01G046400.1 Wheat plasma membrane 47.5 42.38
CDY05123 Canola plasma membrane 36.25 39.91
CDX90787 Canola plasma membrane 35.83 39.45
CDY45751 Canola extracellular, golgi, plasma membrane 38.75 38.75
CDY30733 Canola extracellular, golgi, plasma membrane 38.75 38.75
CDY56741 Canola plasma membrane 37.92 37.92
GSMUA_Achr11P... Banana plasma membrane 46.67 37.84
CDY16757 Canola extracellular, peroxisome, plasma membrane 37.5 37.5
CDY49756 Canola plasma membrane 37.92 37.14
CDY30734 Canola plasma membrane 36.67 36.67
CDY69440 Canola plasma membrane 32.5 36.45
CDY04003 Canola plasma membrane 37.5 36.44
CDX96591 Canola golgi, plasma membrane 37.5 35.86
CDY04628 Canola extracellular, golgi 36.67 35.77
CDY50241 Canola extracellular, golgi, plasma membrane 36.67 35.77
CDY36831 Canola plasma membrane 35.42 35.71
CDY67972 Canola golgi, plasma membrane 37.08 35.46
CDY40867 Canola plasma membrane 36.25 34.94
CDX86834 Canola plasma membrane 36.25 34.94
CDY44578 Canola plasma membrane 34.58 34.87
CDY14399 Canola mitochondrion 31.25 33.94
CDY25828 Canola mitochondrion, plasma membrane 24.58 33.71
CDX84358 Canola plasma membrane 28.75 33.01
CDY61492 Canola golgi, plasma membrane 31.67 32.76
CDY27020 Canola golgi, plasma membrane 35.0 32.43
CDX96199 Canola golgi, plasma membrane 34.58 32.17
CDY20083 Canola plasma membrane 31.25 31.78
CDY24854 Canola golgi, plasma membrane 35.83 31.73
CDX73521 Canola golgi, mitochondrion, plasma membrane, plastid 34.17 30.94
CDX98492 Canola plasma membrane 30.42 30.93
CDY34333 Canola golgi, plasma membrane 35.0 30.77
CDY11047 Canola golgi, plasma membrane 35.0 30.77
CDY03395 Canola endoplasmic reticulum, golgi, plasma membrane 35.0 30.77
CDX92666 Canola golgi, plasma membrane 35.0 30.77
CDX86454 Canola plasma membrane, plastid 37.92 30.64
CDY32341 Canola plasma membrane 30.0 30.51
CDX97600 Canola plasma membrane 30.0 30.51
CDY44448 Canola plasma membrane, plastid 37.92 30.13
CDY16863 Canola endoplasmic reticulum, plasma membrane 34.17 29.6
CDX84877 Canola golgi, plasma membrane 33.33 29.41
CDX87161 Canola endoplasmic reticulum 33.75 29.24
CDX85668 Canola endoplasmic reticulum, golgi, plasma membrane 35.42 28.62
CDX91144 Canola plasma membrane 35.42 28.62
CDY05819 Canola golgi, plasma membrane 35.0 28.57
CDY07676 Canola golgi, plasma membrane 31.67 28.57
CDX71659 Canola golgi, plasma membrane 35.0 28.47
CDX77928 Canola plasma membrane 33.75 28.42
CDY05867 Canola plasma membrane 34.17 28.37
CDY08093 Canola plasma membrane 34.17 28.37
CDX68492 Canola plasma membrane 33.75 28.32
CDX83046 Canola plasma membrane 33.75 28.32
CDX80379 Canola plasma membrane 33.75 28.12
CDX88041 Canola plasma membrane 33.75 28.12
CDX78511 Canola plasma membrane 34.17 28.08
CDX97233 Canola golgi, plasma membrane 34.17 27.52
CDY53626 Canola plasma membrane 33.33 27.49
CDY08964 Canola plastid 32.92 27.43
CDX69663 Canola golgi, plasma membrane 33.75 27.18
CDY45750 Canola cytosol, golgi, plasma membrane 31.67 26.3
Protein Annotations
EnsemblPlants:CDX90555EnsemblPlantsGene:GSBRNA2T00151189001Gene3D:1.20.1280.290GO:A0A078DN41GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:SWEET_sugar_transprPANTHER:PTHR10791PANTHER:PTHR10791:SF29PFAM:PF03083ProteinID:CDX90555
ProteinID:CDX90555.1TMHMM:TMhelixUniParc:UPI0004EEB56FMapMan:24.2.6.1::
Description
BnaA03g42260D
Coordinates
chrLK031863:+:829631..832777
Molecular Weight (calculated)
26455.6 Da
IEP (calculated)
8.900
GRAVY (calculated)
0.605
Length
240 amino acids
Sequence
(BLAST)
001: MAEPSFYIGV IGNVISVLVF LSPVETFWKI VKRKSTEEYK SLPYICTLLG SSLWTYYGIV TPGEYLVSTV NGFGSFVEII YVSLFLIYAP RHLKLNTIVV
101: VALLNVFFPI AAIAATRSAF KDEKMRSQSM GFICAGLNIV MYGSPLSAMK TVVTTKSVKY MPFWLSFFLF LNGAIWAVYA SLQHDVFLLV PNGVGFVFGT
201: IQLILYGIYR NAKPAGLSNG SSEIAADEEE GLTSRAPLLS
Best Arabidopsis Sequence Match ( AT4G15920.1 )
(BLAST)
001: MAEASFYIGV IGNVISVLVF LSPVETFWKI VKRRSTEEYK SLPYICTLLG SSLWTYYGIV TPGEYLVSTV NGFGALVETI YVSLFLFYAP RHLKLKTVDV
101: EAMLNVFFPI AAIVATRSAF EDEKMRSQSI GFISAGLNII MYGSPLSAMK TVVTTKSVKY MPFWLSFFLF LNGAIWAVYA LLQHDVFLLV PNGVGFVFGT
201: MQLILYGIYR NAKPVGLSNG LSEIAQDEEE GLTSRVEPLL S
Arabidopsis Description
SWEET17Nodulin MtN3 family protein [Source:TAIR;Acc:AT4G15920]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.